LOCUS AK293340 1622 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54066 complete cds, highly similar to
Drebrin-like protein.
ACCESSION AK293340
VERSION AK293340.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1622)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1622
/cell_line="GI1"
/cell_type="glioma separated from gliosarcoma"
/clone="BGGI12000749"
/clone_lib="BGGI12"
/db_xref="H-InvDB:HIT000487964"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 128..1210
/codon_start=1
/note="highly similar to Drebrin-like protein"
/protein_id="BAG56856.1"
/transl_table=1
/translation="MKATAMTSAWLAQGTGEGVNDVRKGACASHVSTMASFLKGAHVT
INARAEEDVEPECIMEKVAKASGANYSFHKESGRFQDVGPQAPVGSVYQKTNAVSEIK
RVGKDSFWAKAEKEEENRRLEEKRRAEEAQRQLEQERRERELREAARREQRYQEQGGE
ASPQRTWEQQQEVVSRNRNEQESAVHPREIFKQKERAMSTTSISSPQPGKLRSPFLQK
QLTQPETHFGREPAAAISRPRADLPAEEPAPSTPPCLVQAEEEAVYEEPPEQETFYEQ
PPLVQQQGAGSEHIDHHIQGQGLSGQGLCARALYDYQAADDTEISFDPENLITGIEVI
DEGWWRGYGPDGHFGMFPANYVELIE"
BASE COUNT 346 a 470 c 526 g 280 t
ORIGIN
1 agcagcggcg cggagactgc ggggcgggcc atggcggcga acctgagccg gaacgggcca
61 gcgctgcaag aggcctacgt gcgggtggtc accgagaagt ccccgaccga ctgggctctc
121 tttacctatg aaggcaacag caatgacatc cgcgtggctg gcacagggga caggcgaggg
181 cgtgaacgat gtgcggaagg gagcctgtgc cagccacgtc agcaccatgg ccagcttcct
241 gaagggggcc catgtgacca tcaacgcacg ggccgaggag gatgtggagc ctgagtgcat
301 catggagaag gtggccaagg cttcaggtgc caactacagc tttcacaagg agagtggccg
361 cttccaggac gtgggacccc aggccccagt gggctctgtg taccagaaga ccaatgccgt
421 gtctgagatt aaaagggttg gtaaagacag cttctgggcc aaagcagaga aggaggagga
481 gaaccgtcgg ctggaggaaa agcggcgggc cgaggaggca cagcggcagc tggagcagga
541 gcgccgggag cgtgagctgc gtgaggctgc acgccgggag cagcgctatc aggagcaggg
601 tggcgaggcc agcccccaga ggacgtggga gcagcagcaa gaagtggttt caaggaaccg
661 aaatgagcag gagtctgccg tgcacccgag ggagattttc aagcagaagg agagggccat
721 gtccaccacc tccatctcca gtcctcagcc tggcaagctg aggagcccct tcctgcagaa
781 gcagctcacc caaccagaga cccactttgg cagagagcca gctgctgcca tctcaaggcc
841 cagggcagat ctccctgctg aggagccggc gcccagcact cctccatgtc tggtgcaggc
901 agaagaggag gctgtgtatg aggaacctcc agagcaggag accttctacg agcagccccc
961 actggtgcag cagcaaggtg ctggctctga gcacattgac caccacattc agggccaggg
1021 gctcagtggg caagggctct gtgcccgtgc cctgtacgac taccaggcag ccgacgacac
1081 agagatctcc tttgaccccg agaacctcat cacgggcatc gaggtgatcg acgaaggctg
1141 gtggcgtggc tatgggccgg atggccattt tggcatgttc cctgccaact acgtggagct
1201 cattgagtga ggctgagggc acatcttgcc cttcccctct cagacatggc ttccttattg
1261 ctggaagagg aggcctggga gttgacattc agcactcttc caggaatagg acccccagtg
1321 aggatgaggc ctcagggctc cctccggctt ggcagactca gcctgtcacc ccaaatgcag
1381 caatggcctg gtgattccca cacatccttc ctgcatcccc cgaccctccc agacagcttg
1441 gctcttgccc ctgacaggat actgagccaa gccctgcctg tggccaagcc ctgagtggcc
1501 actgccaagc tgcggggaag ggtcctgagc aggggcatct gggaggctct ggctgccttc
1561 tgcatttatt tgcctttttt ctttttctct tgcttctaag gggtggtggc caccactgtt
1621 ta
//