LOCUS AK293281 1621 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ58752 complete cds, highly similar to Homo
sapiens RCD1 required for cell differentiation 1 homolog (RQCD1),
mRNA.
ACCESSION AK293281
VERSION AK293281.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1621)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1621
/cell_type="normal astrocytes (NHA5732)"
/clone="ASTRO2011737"
/clone_lib="ASTRO2"
/db_xref="H-InvDB:HIT000487905"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal astrocytes"
/organism="Homo sapiens"
CDS 376..1371
/codon_start=1
/note="highly similar to Homo sapiens RCD1 required for
cell differentiation 1 homolog (RQCD1), mRNA"
/protein_id="BAH11481.1"
/transl_table=1
/translation="MHSLATAAPVPTTLAQVDREKIYQWINELSSPETRENALLELSK
KRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVAS
HPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIVETGFHHVGQADLELPT
SSDLPASASQSAGITGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFIL
QKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPR
AREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ"
BASE COUNT 388 a 430 c 428 g 375 t
ORIGIN
1 agttgtcttg ccgggactgt ccatcttttc ccgccgttca ctggcttttg gaggcgggtc
61 agagttcacg ccgctctctg gaaataactg ctcaaagcca gaagttgcgg ggactagtgg
121 tcgcggacgt ccttccggtc ctaaatctta aggggcaaag gacatactct gggactgtta
181 actaggccct ggaggcggga agaggatgtg tgggtggggt caggggtgag aggtcagagg
241 gccgcgaagt gggcggagcg agccggagtc ggatggcggc tacggcggct cattattttc
301 cgctgcaggg gtgctgaagg ggggacgcgg gtcggacgcg tccggctgtg gaagagagcg
361 gcggccgctc acaacatgca cagcctggcg acggctgcgc ctgtgcctac tacactggca
421 caagtggata gagaaaagat ctatcagtgg atcaatgagc tgtccagtcc tgagactagg
481 gaaaatgctt tgctggagct aagtaagaag cgagaatctg ttcctgacct tgcacccatg
541 ctgtggcatt catttggtac tattgcagca cttttacagg aaattgtaaa tatttatcca
601 tctatcaacc cacccacctt gacagcacac cagtctaaca gagtttgcaa tgctctggca
661 ttactgcaat gtgtagcatc acatccagaa accaggtcag cgtttctcgc agcacacatc
721 ccactttttt tgtacccctt tttgcacact gtcagcaaaa cacgtccctt tgagtatctc
781 cggctcacca gccttggagt tattgtagag acggggtttc accatgttgg ccaggctgat
841 cttgaactcc cgacctcaag tgatctgccc gcctcggcct cccaaagtgc tgggattaca
901 ggggccctgg tgaaaacaga tgaacaagaa gtaatcaact ttttattaac aacagaaatt
961 atccctttat gtttgcgaat tatggaatct ggaagtgaac tttctaaaac agttgccaca
1021 ttcatcctcc agaagatctt gttagatgac actggtttgg cttatatatg tcagacgtat
1081 gagcgtttct cccatgttgc catgatcttg ggtaagatgg tcctgcagct atccaaagag
1141 ccttctgccc gtctgctgaa gcatgtagtg agatgttacc ttcgactttc agataacccc
1201 agggcacgtg aagcactcag acagtgcctc cctgaccagc tgaaagacac aaccttcgcc
1261 caggtgctaa aagatgacac caccacgaaa cgctggcttg cacaactggt gaagaacctg
1321 caagagggcc aggtcaccga tccccggggt atccccctgc cccctcagtg atccttccct
1381 gttccctccc actactcccc caagttgggg aaaggagggg gaacctacga gaaaaacagc
1441 tcaggtttta tcaccgactg ggaatagaca acctcaatgc tgaaccgcac tggagaaaag
1501 gggcaaggta cccctgctga ggtgtatggg ctgccatctc aggctgtctt gaggacctgg
1561 gctccctctg ctactcccag gaaatgggct cctgacacag cagtctgcca ccacagcccc
1621 a
//