LOCUS AK293223 1559 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55185 complete cds, highly similar to Histone deacetylase 11. ACCESSION AK293223 VERSION AK293223.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1559) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1559 /cell_type="normal astrocytes (NHA5732)" /clone="ASTRO2000258" /clone_lib="ASTRO2" /db_xref="H-InvDB:HIT000487847" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal astrocytes" /organism="Homo sapiens" CDS 119..1009 /codon_start=1 /note="highly similar to Histone deacetylase 11" /protein_id="BAG56762.1" /transl_table=1 /translation="MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLL VVHTRRYLNELKRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFC AYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPG DRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLG GLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIGP ESPSVSAQNSDTPLLPPAVP" BASE COUNT 308 a 437 c 510 g 304 t ORIGIN 1 agggcgaggg cggggacggc cgggcgggcg cgccaggcta cacacaaccc agctgtacca 61 gcatgtgcca gagacacgct ggccaatcgt gtactcgccg cgctacaaca tcaccttcat 121 gggcctggag aagctgcatc cctttgatgc cggaaaatgg ggcaaagtga tcaatttcct 181 aaaagaagag aagcttctgt ctgacagcat gctggtggag gcgcgggagg cctcggagga 241 ggacctgctg gtggtgcaca cgaggcgcta tcttaatgag ctcaagagga aggtgctgag 301 gccccttcgg acccagacag gaggaaccat aatggcgggg aagctggctg tggagcgagg 361 ctgggccatc aacgtggggg gtggcttcca ccactgctcc agcgaccgtg gcgggggctt 421 ctgtgcctat gcggacatca cgctcgccat caagtttctg tttgagcgtg tggagggcat 481 ctccagggct accatcattg atcttgatgc ccatcagggc aatgggcatg agcgagactt 541 catggacgac aagcgtgtgt acatcatgga tgtctacaac cgccacatct acccagggga 601 ccgctttgcc aagcaggcca tcaggcggaa ggtggagctg gagtggggca cagaggatga 661 tgagtacctg gataaggtgg agaggaacat caagaaatcc ctccaggagc acctgcccga 721 cgtggtggta tacaatgcag gcaccgacat cctcgagggg gaccgccttg gggggctgtc 781 catcagccca gcgggcatcg tgaagcggga tgagctggtg ttccggatgg tccgtggccg 841 ccgggtgccc atccttatgg tgacctcagg cgggtaccag aagcgcacag cccgcatcat 901 tgctgactcc atacttaatc tgtttggcct ggggctcatt gggcctgagt cacccagcgt 961 ctccgcacag aactcagaca caccgctgct tccccctgca gtgccctgac ccttgctgcc 1021 ctgcctgtca cgtggccctg cctatccgcc ccttagtgct ttttgttttc taacctcatg 1081 gggtggtgga ggcagccttc agtgagcatg gaggggcagg gccatccctg gctggggcct 1141 ggagctggcc cttcctctac ttttccctgc tggaagccag aagggcttga ggcctctatg 1201 ggtgggggca gaaggcagag cctgtgtccc agggggaccc acacgaagtc accagcccat 1261 aggtccaggg aggcaggcag ttaactgaga attggagagg acaggctagg tcccaggcac 1321 agcgagggcc ctgggcttgg ggtgttctgg ttttgagaac ggcagaccca ggtcggagtg 1381 aggaagcttc cacctccatc ctgactaggc ctgcatccta actgggcctc cctccctccc 1441 cttggtcatg ggatttgctg ccctctttgc cccagagctg aagagctata ggcactggtg 1501 tggatggccc aggaggtgct ggagctaggt ctccaggtgg gcctggttcc caggcagca //