LOCUS AK293166 1875 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54666 complete cds.
ACCESSION AK293166
VERSION AK293166.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1875)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1875
/cell_line="NB69"
/cell_type="neuroblastoma"
/clone="3NB692008526"
/clone_lib="3NB692"
/db_xref="H-InvDB:HIT000487790"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 211..1833
/codon_start=1
/protein_id="BAG56710.1"
/transl_table=1
/translation="MQVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEH
KSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEK
MPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKC
DSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLA
HREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIE
ALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQ
HVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKP
AVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLRDNTNQTENRF
QKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSN
ALWDESDDSNSEIEAALRPRNHNTDDSDDFYD"
BASE COUNT 629 a 409 c 440 g 397 t
ORIGIN
1 ccttcggcaa ccccggccga acggccaccc agaggctgtg ctgagctggc gcagcggcag
61 cagcatgagc cggaccctcg catcggccgt gcccctgtcg agtcccgact actacgagag
121 gctgggccaa ctccagcacg ggctgcggga cagtgaaaag aagagattgg acctggaaaa
181 gaaactttat gaatataatc agtctgatac atgcaggttg cagtgcacga ggggattaac
241 tcaggaacag ccatgtcaag aggattgtat caaccagcaa caatctttat gggccgccaa
301 atgtcagcca tcttaagcat gagagatttc agtacagagc acaaatctcc ccagcccaca
361 aagaactttt caattcctga cccacattca caccgacaga cagcccagag cagtaatgtg
421 acagacagct gtgtagtaca aactagtaat gacacacagt gcttaaataa gtctgacaac
481 atagatggaa aggcatctct tcagattggt gagaaaatgc cagtcacagc cagtgtattg
541 tctgaggagg aacaaactca ttgcttggag ataggaagta acacacgtca tggcaagagt
601 aatttatctg aaggcaaaaa gtctgctgaa ctcaattccc cgttacggga aagattaagt
661 ccagagaaca gaaccactga tttaaagtgt gacagttcca gcggatcaga gggagaaata
721 ctgacacggg aacatattga agttgaggaa aaaagagcca gcccgccagt ctctccgata
781 ccagtttcag aatactgtga atctgaaaat aagtggtctc aagagaagca ttctccttgg
841 gaaggtgttt cagatcatct tgctcacagg gaaccaaagt cacaaaagcc cttcagaaaa
901 atgcaggaag aggaggagga aagttggagc accagcagtg accttaccat ttcaataagt
961 gaagatgatc tgattttaga gagcccagaa ccacagccaa atccaggtgg caagatggag
1021 ggagaagacg gaatagaggc cttaaaatta atccatgctg agcaagaaag agttgcccta
1081 tccactgaaa aaaattgtat tttgcaaacc ctaagctctc ctgattcaga aaaggaatcc
1141 tccactaacg caccaacaag agaacctgga caaacaccag actcagacgt accgagggca
1201 caggtgggtc agcatgttgc caccttgaaa gaacatgata attctgtcaa agaagaggca
1261 acagcattat tgagaaaagc ccttacagaa gagtgtggcc gtaggtcagc tattcacagt
1321 agtgaatcat cttgcagctt gccatctatt ctgaatgaca atagtggaat aaaggaagcc
1381 aaacctgctg tatggctcaa cagtgttcct acaagggaac aagaagtttc aagtggctgt
1441 ggagacaaga gcaagaaaga aaatgtggct gcagatatcc caatcacaga aacagaagcc
1501 tatcagttgc tgaagaaggc cacccttcgg gataatacaa atcaaactga aaacaggttt
1561 caaaagacag atgcttctgt gtcacacttg tcaggtttga atattggcag cggtgcattc
1621 gagacaaaga cagctaacaa aattgcttcg gaagctagtt tttcatctag tgaaggaagt
1681 cctttgtcaa ggcatgaaaa caaaaagaaa cccgtgatca atttaaaatc taatgccctc
1741 tgggatgagt ctgatgacag taactcagaa attgaggctg ctttacgccc cagaaaccat
1801 aacaccgatg attctgatga tttttatgac taacgtgctg tgacattggt ttcaaataaa
1861 gtctttaaac aaact
//