LOCUS AK293014 4333 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77250 complete cds, highly similar to Homo
sapiens isoleucine-tRNA synthetase (IARS), transcript variant
short, mRNA.
ACCESSION AK293014
VERSION AK293014.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4333)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4333
/clone="TRACH3037918"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425811"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 81..3869
/codon_start=1
/note="highly similar to Homo sapiens isoleucine-tRNA
synthetase (IARS), transcript variant short, mRNA"
/protein_id="BAF85703.1"
/transl_table=1
/translation="MLQQVPENINFPAEEEKILEFWTEFNCFQECLKQSKHKPKFTFY
DGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGI
RGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQFMESVW
WVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDETV
SLVAWTTTPWTLPSNLAVCVNPEMQYVKIKDVARGRLLILMEARLSALYKLESDYEIL
ERFPGAYLKGKKYRPLFDYFLKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGAEDYR
VCMDFNIIRKDSLPVCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLLVATT
FTHSYPFCWRSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLK
DARDWTISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTI
PSRCGKGSLHRISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRG
WFYTLLVLATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALR
LYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNE
NTVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRR
RLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT
LSIHYLMLPRVREELIDKKTESAVSQMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQD
PEALKDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFKAVMT
SIKQLSSEELEQFQKTGTIVVEGHELHDEDIRLMYTFDQATGGTAQFEAHSDAQALVL
LDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGTYLNSVIESHT
EFIFTTIKAPLKPYPVSPSDKVLIQEKTQLKGSELEITLTRGSSLPGPACAYVNLNIC
ANGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFGVKNTELAVFHDETEIQNQTDLLS
LSGKTLCVTAGSAPSLINSSSTLLCQYINLQLLNAKPQECLMGTVGTLLLENPLGQNG
LTHQGLLYEAAKVFGLRSRKLKLFLNETQTQEITEDIPVKTLNMKTVYVSVLPTTADF
"
BASE COUNT 1261 a 898 c 996 g 1178 t
ORIGIN
1 agcgtggacg ccggatgagt tgcttttagg cttgctggcc cgcggggctg tccaggcacg
61 cgaggcccct cagcaacaaa atgcttcaac aagttccaga aaacataaat tttcctgctg
121 aagaagagaa aatcttggag ttttggactg aatttaattg ttttcaggaa tgcttaaagc
181 aatcaaaaca taaaccaaaa tttaccttct atgatggtcc tccttttgca actggactgc
241 ctcactatgg acatatactt gcgggtacaa ttaaagatat agttacaaga tatgctcacc
301 agagtgggtt tcatgttgac agaagatttg gatgggattg ccatggctta cctgtggaat
361 atgaaattga taagacactg ggaatcagag gaccagagga tgtggccaaa atggggatta
421 cagagtataa caatcagtgc cgagcaattg tgatgagata ttctgctgag tggaagtcta
481 ctgttagcag acttggccga tggattgact ttgacaatga ctataaaact ctgtatccac
541 aattcatgga atcagtctgg tgggtcttca aacaactcta tgataaaggc cttgtttata
601 gaggtgtgaa agtcatgccc ttctctacgg catgtaacac tccactttcc aacttcgagt
661 cacaccagaa ttataaggat gttcaagatc cttcagtatt tgtaactttc cctttggaag
721 aagatgaaac tgtatcttta gttgcttgga caaccactcc ctggactcta cctagtaacc
781 ttgctgtgtg tgttaatcca gaaatgcaat atgtgaaaat taaagatgtt gccagaggac
841 gattactcat tttaatggaa gccagattgt cagccctcta taaattggag agtgactatg
901 agatccttga aagatttcct ggtgcctatc ttaaaggcaa gaagtacagg cccctgtttg
961 actatttcct gaagtgtaaa gagaatggcg ctttcactgt gcttgttgac aactatgtga
1021 aggaagaaga aggcacaggg gttgtccacc aagctcctta cttcggtgct gaggactatc
1081 gggtctgtat ggactttaac attattcgga aagactcact ccctgtttgc cctgtggatg
1141 cttcaggctg cttcacaacg gaggtgacag atttcgcagg acagtatgtg aaggatgctg
1201 acaaaagtat catcaggact ttgaaggaac aaggccgact tctggttgcc accaccttca
1261 ctcacagcta ccctttttgc tggagatcag acactcctct aatttacaaa gcagtgccca
1321 gctggtttgt gcgagtggag aacatggtgg accagctcct aaggaacaat gacctgtgct
1381 actgggtccc agagttggta cgagaaaaac gatttggaaa ttggctgaaa gatgcacgtg
1441 actggacaat ttccagaaac agatactggg gcacccccat cccactgtgg gtcagcgatg
1501 actttgagga ggtggtatgc attgggtcag tggcggaact tgaagaactg tcaggagcaa
1561 agatctcaga tctccacaga gagagtgttg accacctgac cattccttca cgctgtggga
1621 agggatcctt gcaccgcatc tctgaagtgt ttgactgttg gtttgagagt ggcagcatgc
1681 cctatgctca ggttcattac ccgtttgaaa acaagaggga gtttgaggat gcttttcctg
1741 cagatttcat tgccgagggc atcgaccaaa ccagaggatg gttttatacc ctgctggtgc
1801 tggccacggc cctctttgga caaccgcctt tcaagaacgt aattgtgaat gggcttgtcc
1861 tggcaagtga tggccaaaaa atgagcaaac ggaaaaagaa ttatccagat ccagtttcca
1921 tcatccagaa gtatggtgct gatgccctca gattatatct gattaactcc cctgtggtga
1981 gagcagaaaa cctccgcttt aaagaagagg gtgtgcggga cgtccttaag gatgtactgc
2041 tcccatggta caatgcctat cgcttcttaa tccagaacgt tctgaggctc cagaaggagg
2101 aagaaataga atttctctac aatgagaaca cggttagaga aagccccaac attacagacc
2161 ggtggatcct gtccttcatg cagtctctca ttggcttctt tgagactgaa atggcagctt
2221 ataggcttta tactgtggtg cctcgcctgg tcaagtttgt agatattctg accaattggt
2281 atgttagaat gaaccgcaga agattaaagg gtgaaaatgg gatggaggat tgtgtcatgg
2341 ccctagaaac cttgtttagt gttctgcttt ctctttgcag acttatggct ccctacacac
2401 cttttctcac tgaattgatg taccagaatc taaaggtgct gattgaccct gtttctgttc
2461 aggacaagga cacactcagc attcactacc tcatgctgcc ccgtgttcga gaagaattga
2521 ttgacaagaa aacagagagt gcagtatctc agatgcagtc tgtgattgaa cttggaagag
2581 tgatcagaga ccgaaaaact attcccataa agtatccttt gaaagaaatt gtggttatcc
2641 atcaagatcc agaagctctt aaagatatca agtctttgga gaagtatatc attgaggaac
2701 tcaatgttcg aaaagttaca ctgtctacag ataaaaacaa gtatggcatt cggctaaggg
2761 cagaaccaga tcacatggtc ctggggaagc gtctgaaggg agcctttaag gcagtgatga
2821 cgtccatcaa gcagttgagc agtgaggagc tggagcagtt ccagaagact gggaccattg
2881 ttgtggaagg ccatgaattg cacgatgaag acatccgcct catgtacacc tttgatcagg
2941 ccacaggtgg gactgcgcaa tttgaagcac actcagatgc tcaggctttg gtcctcttag
3001 atgtcactcc tgaccagtca atggtagatg aaggaatggc tcgggaagtc atcaatcgca
3061 tacagaaact tcgcaaaaag tgcaatctgg ttccaactga tgaaatcaca gtgtactata
3121 aagcaaagtc tgaaggaaca tatctgaata gtgttattga aagccacaca gagttcatat
3181 ttaccaccat aaaggctccc ttgaaaccat atccagtttc tccatcggat aaagtcctta
3241 ttcaagaaaa aacacagttg aagggatctg aactggaaat tacactcacc agaggatctt
3301 cccttcctgg tcctgcttgt gcatatgtca atcttaacat ttgtgcaaat ggcagtgaac
3361 aaggtggagt attgctcctg gaaaatccaa aaggtgacaa taggttggac cttttaaagc
3421 tgaagagtgt tgtcactagc atttttggtg tgaaaaatac agagctggct gtcttccatg
3481 atgaaacaga aatacaaaac caaactgact tactgagtct tagtggaaaa acactttgtg
3541 tgactgcagg atcggctccc tctctgatca acagttctag tactcttctt tgtcagtata
3601 tcaacctaca gctcctgaat gcaaagccac aagagtgttt aatggggaca gtgggcactc
3661 tcctgcttga aaacccactt gggcagaatg ggctcaccca ccaaggtctt ctgtatgaag
3721 cagccaaggt gtttggcctt cggagcagga agctaaagct gtttctgaat gagacccaaa
3781 cgcaggaaat tacagaagac atccccgtga agactttgaa tatgaagact gtgtatgttt
3841 ctgtgttacc aacaacagca gacttctagc atgtacttat caatgttgtt cggtcagccc
3901 ttccctaatt acacctatcc cctacacata catgcacata gacacacaca tgaacacact
3961 gaagatattt ccttcaggtg tgtgtaaaat atgctgcttg gattgaaatt caaatgggat
4021 tgattagtca agtaacttga gacctcacag taatcttcac acttaacctt agacacctat
4081 gcagtcatgt tgggagcagg ttacaatgtt acttcagccc acagtttatt tctatacttg
4141 agttcttaag tacagaagat agaagtgatt taaatggcat agtatatata tcattttctg
4201 gccttttaaa atttatttga gacctcttga tgaaatggac atattatata tttctgccac
4261 ctggattttc ctggataatt tgatggaata ttttaagttt cagtaaatca gaacaataaa
4321 caaactcaga tat
//