LOCUS AK293010 3967 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78769 complete cds, highly similar to Homo
sapiens attractin (ATRN), transcript variant 2, mRNA.
ACCESSION AK293010
VERSION AK293010.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3967)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3967
/clone="TRACH3037454"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425807"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 91..3909
/codon_start=1
/note="highly similar to Homo sapiens attractin (ATRN),
transcript variant 2, mRNA"
/protein_id="BAF85699.1"
/transl_table=1
/translation="MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLG
AGLRLPRLLSPPLRPRLLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECD
RPCVNGGRCNPGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTW
LIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPE
VVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSSDTVECECSEN
WKGEACDIPHCTDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEY
SNLKLPRASHKAVVNGNIMWVVGGYMFNHSDYNMVLAYDLASREWLPLNRSVNNVVVR
YGHSLALYKDKIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYAVVGHSAH
IVTLKNGRVVMLVIFGHCPLYGYISNVQEYDLDKNTWSILHTQGALVQGGYGHSSVYD
HRTRALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILKDSRFFRYLHTAVIVSGTM
LVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPDLHHDVNRFGHSAALHNS
TMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAAGPGIRCVWNTGSSQCISWALAT
DEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDCHWCNDHCVPRNHSCSEGQIS
IFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQECIALPENICGIGWHLVGNS
CLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLRIMQSSQSMSKLTLTPW
VGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPSTRGLKAATCINPLN
GSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQ
CMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQ
APTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKH
CETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRY
QGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINASKNFN
LNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNFTW
PIKIQVQTEQ"
BASE COUNT 994 a 942 c 1051 g 980 t
ORIGIN
1 acagccccgc cccgcacggc caggcgaagc ggagccggcc gtgcggtgtg tgtgtatgtg
61 ttcgcggggc gccgtctcag ccccgggaag atggtggctg cagcggcggc aactgaggca
121 aggctgagga ggaggacggc ggcgacggca gcgctcgcgg gcaggagcgg cgggccgcac
181 tgggactggg acgtgaccag ggctgggagg ccggggctgg gggccgggct gcgcctcccg
241 cggctgctgt ctccaccgct gcggccacgg ctgctgctgc tgctgttgtt gctctcgccg
301 ccgctgctgc tgctgctgct gccctgtgag gccgaggccg cggcggcggc ggcggcggtg
361 tcgggctcag ccgcagccga ggccaaggaa tgtgaccggc cctgtgtcaa cggcggtcgc
421 tgcaaccctg gcaccggcca gtgcgtctgc cccgccggct gggtgggcga gcaatgccag
481 cactgcgggg gccgcttcag actaactgga tcttctgggt ttgtgacaga tggacctgga
541 aattataaat acaaaacgaa gtgcacgtgg ctcattgaag gacagccaaa tagaataatg
601 agacttcgtt tcaatcattt tgctacagag tgtagttggg accatttata tgtttatgat
661 ggggactcaa tttatgcacc gctagttgct gcatttagtg gcctcattgt tcctgagaga
721 gatggcaatg agactgtccc tgaggttgtt gccacatcag gttatgcctt gctgcatttt
781 tttagtgatg ctgcttataa tttgactgga tttaatatta cttacagttt tgatatgtgt
841 ccaaataact gctcaggccg aggagagtgt aagatcagta atagcagcga tactgttgaa
901 tgtgaatgtt ctgaaaactg gaaaggtgaa gcatgtgaca ttcctcactg tacagacaac
961 tgtggttttc ctcatcgagg catctgcaat tcaagtgatg tcagaggatg ctcctgcttc
1021 tcagactggc agggtcctgg atgttcagtt cctgtaccag ctaaccagtc attttggact
1081 cgagaggaat attctaactt aaagctcccc agagcatctc ataaagctgt ggtcaatgga
1141 aacattatgt gggttgttgg aggatatatg ttcaaccact cagattataa catggttcta
1201 gcgtatgacc ttgcttctag ggagtggctt ccactaaacc gttctgtgaa caatgtggtt
1261 gttagatatg gtcattcttt ggcattatac aaggataaaa tttacatgta tggaggaaaa
1321 attgattcaa ctgggaatgt gaccaatgag ttgagagttt ttcacattca taatgagtca
1381 tgggtgttgt tgacccctaa ggcaaaggag cagtatgcag tggttgggca ctctgcacac
1441 attgttacac tgaagaatgg ccgagtggtc atgctggtca tctttggtca ctgccctctc
1501 tatggatata taagcaatgt gcaggaatat gatttggata agaacacatg gagtatatta
1561 cacacccagg gtgcccttgt gcaagggggt tacggccata gcagtgttta cgaccatagg
1621 accagggccc tatacgttca tggtggctac aaggctttca gtgccaataa gtaccggctt
1681 gcagatgatc tctaccgata tgatgtggat acccagatgt ggaccattct taaggacagc
1741 cgatttttcc gttacttgca cacagctgtg atagtgagtg gaaccatgct ggtgtttgga
1801 ggaaacacac acaatgacac atctatgagc catggcgcca aatgcttctc ttcagatttc
1861 atggcctatg acattgcctg tgaccgctgg tcagtgcttc ccagacctga tctccaccat
1921 gatgtcaaca gatttggcca ttcagcagcc ttacacaaca gcaccatgta tgtgttcggt
1981 ggtttcaata gtctcctcct cagcgacatc ctggtattca cctcggaaca gtgtgatgcg
2041 catcggagtg aagccgcttg tttagcagca ggacctggta ttcggtgtgt gtggaacaca
2101 gggtcgtctc agtgtatctc gtgggcgctg gcaactgatg aacaagaaga aaagttaaaa
2161 tcagaatgtt tttccaaaag aactcttgac catgacagat gtgaccagca cacagattgt
2221 tacagctgca cagccaacac caatgactgc cactggtgca atgaccattg tgtccccagg
2281 aaccacagct gctcagaagg ccagatctcc atttttaggt atgagaattg ccccaaggat
2341 aaccccatgt actactgtaa caagaagacc agctgcagga gctgtgccct ggaccagaac
2401 tgccagtggg agccccggaa tcaggagtgc attgccctgc ccgaaaatat ctgtggcatt
2461 ggctggcatt tggttggaaa ctcatgtttg aaaattacta ctgccaagga gaattatgac
2521 aatgctaaat tgttctgtag gaaccacaat gcccttttgg cttctcttac aacccagaag
2581 aaggtagaat ttgtccttaa gcagctgcga ataatgcagt catctcagag catgtccaag
2641 ctcaccttaa ccccatgggt cggccttcgg aagatcaatg tgtcctactg gtgctgggaa
2701 gatatgtccc catttacaaa tagtttacta cagtggatgc cgtctgagcc cagtgatgct
2761 ggattctgtg gaattttatc agaacccagt actcggggac tgaaggctgc aacctgcatc
2821 aacccactca atggtagtgt ctgtgaaagg cctgcaaacc acagtgctaa gcagtgccgg
2881 acaccatgtg ccttgaggac agcatgtgga gattgcacca gcggcagctc tgagtgcatg
2941 tggtgcagca acatgaagca gtgtgtggac tccaatgcct atgtggcctc cttccctttt
3001 ggccagtgta tggaatggta tacgatgagc acctgccccc ctgaaaattg ttcaggctac
3061 tgtacctgta gtcattgctt ggagcaacca ggctgtggct ggtgtactga tcccagcaat
3121 actggcaaag ggaaatgcat agagggttcc tataaaggac cagtgaagat gccttcgcaa
3181 gcccctacag gaaatttcta tccacagccc ctgctcaatt ccagcatgtg tctagaggac
3241 agcagataca actggtcttt cattcactgt ccagcttgcc aatgcaacgg ccacagtaaa
3301 tgcatcaatc agagcatctg tgagaagtgt gagaacctga ccacaggcaa gcactgcgag
3361 acctgcatat ctggcttcta cggtgatccc accaatggag ggaaatgtca gccatgcaag
3421 tgcaatgggc acgcgtctct gtgcaacacc aacacgggca agtgcttctg caccaccaag
3481 ggcgtcaagg gggacgagtg ccagctatgt gaggtagaaa atcgatacca aggaaaccct
3541 ctcagaggaa catgttatta tactcttctt attgactatc agttcacctt tagtctatcc
3601 caggaagatg atcgctatta cacagctatc aattttgtgg ctactcctga cgaacaaaac
3661 agggatttgg acatgttcat caatgcctcc aagaatttca acctcaacat cacctgggct
3721 gccagtttct cagctggaac ccaggctgga gaagagatgc ctgttgtttc aaaaaccaac
3781 attaaggagt acaaagatag tttctctaat gagaagtttg attttcgcaa ccacccaaat
3841 atcactttct ttgtttatgt cagtaatttc acctggccca tcaaaattca ggtgcaaact
3901 gaacaatgag gacgcatgga cacaggaagg ggaacatcac acaccagggc ctgttgtggg
3961 gtggggg
//