LOCUS AK293009 4479 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75520 complete cds, highly similar to
Synthetic construct Homo sapiens homeodomain interacting protein
kinase 3 (HIPK3) mRNA.
ACCESSION AK293009
VERSION AK293009.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4479)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4479
/clone="TRACH3037424"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425806"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 364..3948
/codon_start=1
/note="highly similar to Synthetic construct Homo sapiens
homeodomain interacting protein kinase 3 (HIPK3) mRNA"
/protein_id="BAF85698.1"
/transl_table=1
/translation="MASQVLVYPPYVYQTQSSAFCSVKKLKVEPSSCVFQERNYPRTY
VNGRNFGNSHPPTKGSAFQTKIPFNRPRGHNFSLQTSAVVLKNTAGATKVIAAQAQQA
HVQAPQIGAWRNRLHFLEGPQRCGLKRKSEELDNHSSAMQIVDELSILPAMLQTNMGN
PVTVVTATTGSKQNCTTGEGDYQLVQHEVLCSMKNTYEVLDFLGRGTFGQVVKCWKRG
TNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFE
MLEQNLYDFLKQNKFSPLPLKVIRPILQQVATALKKLKSLGLIHADLKPENIMLVDPV
RQPYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAEL
FLGWPLYPGALEYDQIRYISQTQGLPGEQLLNVGTKSTRFFCKETDMSHSGWRLKTLE
EHEAETGMKSKEARKYIFNSLDDVAHVNTVMDLEGSDLLAEKADRREFVSLLKKMLLI
DADLRITPAETLNHPFVNMKHLLDFPHSNHVKSCFHIMDICKSHLNSCDTNNHNKTSL
LRPVASSSTATLTANFTKIGTLRSQALTTSAHSVVHHGIPLQAGTAQFGCGDAFQQTS
IICPPAIQGIPATHGKPTSYSIRVYNTVPLVTQAPAVQPLQIRPGVLSQTWSGRTQQM
LVPAWQQVTPLAPATTTLTSESVAGSHRLGDWGKMISCSNHYNSVMPQPLLTNQITLS
APQPVSVGIAYVVWPQPATTKKNKQCQNRSNSLQNTNIPHSAFISPKIINGKDVEEVS
CIETQDNQNSEGEARNCCETSIRQDSDSSVSDKQRQTIIIADSPSPAVSVITISSDTD
EEETSQRHSLRECKGSLDCEACQSTLNIDRMCSLSSPDSTLSTSSSGQSSPSPCKRPN
SMSDEEQESSCDTVDGSPTSDSSGHDSPFAESTFVEDTHENTELVSSADTETKPAVCS
VVVPPVELENGLNADEHMANTDSICQPLIKGRSAPGRLNQPSAVGTRQQKLTSAFQQQ
HLNFSQVQHFGSGHQEWNGNFGHRRQQAYIPTSVTSNPFTLSHGSPNHTAVHAHLAGN
THLGGQPTLLPYPSSATLSSAAPVAHLLASPCTSRPMLQHPTYNISHPSGIVHQVPVG
LNPRLLPSPTIHQTQYKPIFPPHSYIAASPAYTGFPLSPTKLSQYPYM"
BASE COUNT 1295 a 980 c 1001 g 1203 t
ORIGIN
1 attcattaag gggaacaaac aaacgcgcag gcacgcagct tgagcacccc agccgatggc
61 cgcgtcccgg gctttgtggc cccgtcccca gcgtcgcgga gcagcgggtt tgcagggtgt
121 caactctggg gacgtgcgtg cgtgtgtgtg attgttgggg aggagaaatg tgatccgcgg
181 ctccgcgtcc ccagcggcgg cgggaggaag gcgtggcggc cgcgcggcgg ggctgttgcc
241 ggcttctctc gttacggtgg ctgccgcccg cttcccttcg ccgcactggg agaactggcg
301 gaaagacttt ggatgaaaat gtctgtttct ctgtcgggag ggagacggct gttgtaaaat
361 ggtatggcct cacaagtctt ggtctaccca ccatatgttt atcaaactca gtcaagtgcc
421 ttttgtagtg tgaagaaact caaagtagag ccaagcagtt gtgtattcca ggaaagaaac
481 tatccacgga cctatgtgaa tggtagaaac tttggaaatt ctcatcctcc cactaagggt
541 agtgcttttc agacaaagat accatttaat agacctcgag gacacaactt ttcattgcag
601 acaagtgctg ttgttttgaa aaacactgca ggtgctacaa aggtcatagc agctcaggca
661 cagcaagctc acgtgcaggc acctcagatt ggggcgtggc gaaacagatt gcatttccta
721 gaaggccccc agcgatgtgg attgaagcgc aagagtgagg agttggataa tcatagcagc
781 gcaatgcaga ttgtcgatga attgtccata cttcctgcaa tgttgcaaac caacatggga
841 aatccagtga cagttgtgac agctaccaca ggatcaaaac agaattgtac cactggagaa
901 ggtgactatc agttagtaca gcatgaagtc ttatgctcca tgaaaaatac ttacgaagtc
961 cttgattttc ttggtcgagg cacgtttggc caggtagtta aatgctggaa aagagggaca
1021 aatgaaattg tagcaatcaa aattttgaag aatcatcctt cttatgcccg tcaaggtcaa
1081 atagaagtga gcatattagc aaggctcagt actgaaaatg ctgatgaata taactttgta
1141 cgagcttatg aatgctttca gcaccgtaac catacttgtt tagtctttga gatgctggaa
1201 caaaacttgt atgactttct gaaacaaaat aaatttagtc ccctgccact aaaagtgatt
1261 cggcccattc ttcaacaagt ggccactgca ctgaaaaaat tgaaaagtct tggtttaatt
1321 catgctgatc tcaagccaga gaatattatg ttggtggatc ctgttcggca gccttacagg
1381 gttaaagtaa tagactttgg gtcggccagt catgtatcaa agactgtttg ttcaacatat
1441 ctacaatctc ggtactacag agctccagag attatattgg ggttgccatt ttgtgaagcc
1501 atagacatgt ggtcattggg atgtgtgatt gcagaattat ttcttggatg gccgctctac
1561 ccaggagcct tggagtatga tcagattcga tacatttctc agactcaagg tttgccagga
1621 gaacagttgt taaatgtggg tactaaatcc acaagatttt tttgcaaaga aacagatatg
1681 tctcattctg gttggagatt aaagacattg gaagagcatg aggcagagac aggaatgaag
1741 tctaaagaag ccagaaaata cattttcaac agtctggatg atgtagcgca tgtgaacaca
1801 gtgatggatt tggaaggaag tgatcttttg gctgagaaag ctgatagaag agaatttgtt
1861 agtctgttga agaaaatgtt gctgattgat gcagatttaa gaattactcc agctgagacc
1921 ctgaaccatc cttttgttaa tatgaaacat cttctagatt tccctcatag caaccatgta
1981 aagtcctgtt ttcatattat ggatatttgt aagtcccacc taaattcatg tgacacaaat
2041 aatcacaaca aaacttcact tttaagacca gttgcttcaa gcagtactgc tacactgact
2101 gcaaatttta ctaaaatcgg aacattaaga agtcaggcat tgaccacatc tgctcattca
2161 gttgtgcacc atggaatacc tctgcaggca ggaactgctc agtttggttg tggtgatgct
2221 tttcagcaga catcgattat ctgtccccca gctattcaag gtattcctgc aacacatggt
2281 aaacccacca gttattcaat aagggtatat aatacagttc cacttgtaac tcaggcccca
2341 gctgtgcagc cactacagat ccgaccagga gttctttctc agacgtggtc tggtagaaca
2401 cagcagatgc tggtgcctgc ctggcaacag gtgacacccc tggctcctgc tactactaca
2461 ctaacttctg agagtgtggc tggttcacac aggcttggag actgggggaa gatgatctca
2521 tgcagcaatc attataactc agtgatgccg cagcctcttc tgaccaatca gataacttta
2581 tctgcccctc agccagttag tgtggggatt gcatatgttg tctggcctca gcctgccact
2641 accaagaaaa ataaacagtg ccagaacagg agtaattcat tacagaatac caatatccca
2701 cattcagcat ttatttctcc aaagataatt aatgggaaag atgtcgagga agtaagttgt
2761 atagaaacac aggacaatca gaactcagaa ggagaggcaa gaaattgctg tgaaacatct
2821 atcagacagg actctgattc atcagtttca gacaaacagc ggcaaaccat cattattgcc
2881 gactccccga gtcctgcagt gagtgtcatc actatcagca gtgacactga tgaggaagag
2941 acttcccaga gacattcact cagagaatgt aaaggtagtc tagattgtga agcttgccag
3001 agcactttga atattgatcg gatgtgttca ttaagtagtc ctgatagtac tctgagtacc
3061 agctcctcag ggcagtccag cccatccccc tgcaagagac cgaatagtat gtcagatgaa
3121 gagcaagaaa gtagttgtga tacggtggat ggctctccga catctgactc ttccgggcat
3181 gacagtccat ttgcagagag cacttttgtg gaggacactc atgaaaacac agaattggta
3241 tcctctgctg acacagaaac caagccagct gtctgttctg ttgtggtgcc accagtggaa
3301 ctagaaaatg gcttaaatgc cgatgagcat atggcaaaca cagattctat atgccagcca
3361 ttaataaaag gacgatctgc ccctggaaga ttaaaccagc cttctgcagt gggtactcgt
3421 cagcaaaaat tgacatcagc attccagcag cagcatttga acttcagtca ggttcagcac
3481 tttggatctg ggcatcaaga gtggaatgga aactttgggc acagaagaca gcaagcttat
3541 attcctacta gtgttaccag taatccattc actctttctc atggaagtcc caatcacaca
3601 gcagtgcatg cccacctggc tggaaataca cacctcggag gacagcctac tctacttcca
3661 tacccatcat cagccaccct cagtagtgct gcaccagtgg cccacctgtt agcctctccg
3721 tgtacctcaa gacctatgtt acagcatcca acttataata tctcccatcc cagtggcata
3781 gttcaccaag tcccagtggg cttaaatccc cgtctgttac catccccaac cattcatcag
3841 actcagtaca aaccaatctt cccaccacat tcttacattg cagcatcacc tgcatatact
3901 ggatttccac tgagtccaac aaaactcagc cagtatccat atatgtgaaa aacagtatat
3961 tggggaagct caatgataca aacatttgat taaaaataaa aacatggtat ttaatattag
4021 ccatggcaca agaaaattat ttttgaatca tgtagacttg ggtgcaattt aaacaacttt
4081 gagctttaaa aactcacttt tgatgtgttt tgcacatttg gtataacttg tctttggtca
4141 tgttatcttc ttatgtagta actctagaca ggtgacttat gggagcagaa gtccagtttt
4201 gctcctgcta ttttttataa attgccttct aactagtgca agacacgtct acatttggga
4261 agccattctg tgtacagact tagagcaaca gatgcacata tgtcagaatt acagcataca
4321 agtgaattgt attatccgtg tcttagtgta taaatgttgg gtcacttacc taagaaattg
4381 agctattgtt ctttacattt gcatgtgtct tttgcatggg caaaatgttg cctagacttt
4441 gctcttaaat gttgttctaa taatctcagc tgcattgta
//