LOCUS AK292997 3458 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77477 complete cds, highly similar to Homo
sapiens zinc finger protein 484 (ZNF484), transcript variant 2,
mRNA.
ACCESSION AK292997
VERSION AK292997.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3458)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3458
/clone="TRACH3034800"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425794"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 372..2822
/codon_start=1
/note="highly similar to Homo sapiens zinc finger protein
484 (ZNF484), transcript variant 2, mRNA"
/protein_id="BAF85686.1"
/transl_table=1
/translation="MLENYFNLTSVGCQVPKPEVIFSLEQEEPCMLDGEIPSQSRPDG
DIGFGPLQQRMSEEVSFQSEININLFTRDDPYSILEELWKDDEHTRKCGENQNKPLSR
VVFINKKTLANDSIFEYKDIGEIVHVNTHLVSSRKRPHNCNSCGKNLEPIITLYNRNN
ATENSDKTIGDGDIFTHLNSHTEVTACECNQCGKPLHHKQALIQQQKIHTRESLYLFS
DYVNVFSPKSHAFAHESICAEEKQHECHECEAVFTQKSQLDGSQRVYAGICTEYEKDF
SLKSNRQKTPYEGNYYKCSDYGRAFIQKSDLFRCQRIHSGEKPYEYSECEKNLPQNSN
LNIHKKIHTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPYVCTECGKAFIRKSHFI
THERIHTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPFICSECGKVFTHKTNLIIH
QKIHTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPYKCSDCGKSFTWKSRLRIHQK
CHTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPYVCTECGKAFFHKSHFITHERIH
TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPYRCAECGKAFTDRSNLFTHQKIHTG
EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHYECSECGKAFARKSTLIMHQRIHTGEK
PYICNECGKSFIQKSHLNRHRRIHTGEKPYECSDCGKSFIKKSQLHEHHRIHTGEKPY
ICAECGKAFTIRSNLIKHQKIHTKQKPYKCSDLGKALNWKPQLSMPQKSDNGEVECSM
PQLWCGDSEGDQGQLSSI"
BASE COUNT 1153 a 659 c 728 g 918 t
ORIGIN
1 atgcgcaaac ccaggcagcg ctgtaagaag tacctctagg cctgggaggc attgagaaaa
61 aggaagtggg tcctgttctg gttcttgcga ctatagtcac ctcccgaggc aaatgaccac
121 tgtcctgaga ggacgtgggt gaggggcaga tttctgcccc tttgtccgaa gagccaaaaa
181 tgaccaagtc cctgacttct ttctcaacta ccaatggcag gtaactgagg taactgattc
241 tttcctttgg atctccattc tgctgttgag atcatccaga atcagtgtca ttcaaggacg
301 taactgtaga cttcagtagg gatgagtggc aacaattaga ccttgctcag aaaagcctgt
361 acagagaagt gatgctggaa aactatttca acttgacctc agtgggatgt caagttccca
421 aaccagaagt catcttcagc ttggaacaag aagagccatg tatgttggat ggtgagatcc
481 ccagtcagag ccgtccagat ggggacattg gttttggacc tttacaacag aggatgtctg
541 aagaagtttc tttccagtct gagattaata ttaatctctt cacaagagat gacccatatt
601 ccattttaga agaattgtgg aaagacgatg aacacacaag aaaatgtgga gaaaaccaga
661 acaaaccttt aagtcgtgtt gtcttcatta acaagaaaac actagctaat gacagcatct
721 ttgaatataa ggacattggg gaaatagttc atgtaaacac acacctggtt tcctcaagaa
781 aaagacccca taactgtaac tcgtgtggaa agaatttgga gcctatcata accttatata
841 atagaaacaa tgcaacagaa aattctgata agactattgg agatggtgat attttcactc
901 atttgaattc tcatacagaa gtgactgctt gtgaatgtaa ccaatgtggg aaacctctgc
961 atcataagca agctctcatt caacaacaga aaattcatac tagagagagc ctctatttgt
1021 tttctgacta cgtaaatgtt ttctccccga agtcacatgc ctttgcacat gagagtattt
1081 gtgctgaaga aaagcagcat gaatgccatg aatgtgaggc agtcttcact cagaagtccc
1141 agcttgatgg cagtcagagg gtttatgcag gaatatgcac tgaatatgag aaggattttt
1201 ccctcaagtc aaaccgtcag aaaactcctt atgaggggaa ttactataaa tgcagtgact
1261 atggaagagc ctttatccag aagtcagatc tgttcagatg ccagagaatt cattctggag
1321 aaaaacctta tgagtacagt gaatgtgaga aaaacctccc tcagaattca aaccttaata
1381 tacataaaaa aattcatact ggagggaaac actttgaatg tactgaatgt ggaaaagctt
1441 tcacaaggaa atcaacacta agtatgcatc agaaaatcca tacaggagaa aaaccttatg
1501 tatgtactga atgtgggaag gcctttatcc ggaagtcaca ttttatcaca catgaaagaa
1561 ttcatactgg agaaaaaccc tatgaatgca gtgactgtgg gaaatccttt attaaaaaat
1621 cacaactcca tgtgcatcag cgaattcaca caggagagaa tccctttata tgttcagaat
1681 gtgggaaggt cttcactcac aagacaaatc tcattataca ccagaaaatt catacaggag
1741 aaagacccta tatatgtact gtgtgtggta aggcctttac tgacaggtca aatctcatta
1801 agcaccaaaa aattcatact ggagagaaac cttataaatg cagcgactgt ggaaaatcat
1861 tcacctggaa gtctcggctc aggatacatc agaagtgtca tactggagag agacattatg
1921 aatgcagtga atgtgggaaa gcattcattc agaagtcaac attaagtatg caccagagaa
1981 ttcatagagg ggaaaaacca tatgtttgca ctgaatgtgg taaggccttc ttccacaaat
2041 cccattttat tacacatgag agaattcata ctggagagaa accctatgaa tgcagtattt
2101 gtgggaaatc cttcactaag aaatcacagc tccacgtaca tcagcagatt cacacaggag
2161 agaaacccta taggtgtgct gaatgtggaa aggcttttac tgacagatca aatctcttta
2221 cacaccagaa aattcacact ggagagaaac cttataaatg tagtgactgt gggaaagcct
2281 tcactaggaa gtcaggtctc catatacatc agcaatccca tactggagaa aggcattatg
2341 agtgcagtga atgtgggaaa gcctttgcaa gaaaatcaac actaattatg catcagagaa
2401 ttcatacagg agagaaaccc tatatttgta atgaatgtgg gaaatccttc atccagaagt
2461 cacacttaaa tagacacagg agaattcata ctggagagaa accctatgaa tgcagtgact
2521 gtggcaagtc tttcattaag aaatcacaac tccatgagca tcatcgaatt cacacaggag
2581 agaaaccata tatatgtgct gagtgtggaa aggccttcac catcagatca aatcttatta
2641 aacaccagaa aattcatact aaacagaaac cctataagtg cagtgacttg gggaaagcct
2701 taaactggaa gccacaactc agtatgcctc agaaatctga caatggggaa gtagagtgct
2761 ccatgccaca attatggtgt ggggactcag aaggtgacca aggccaactt tcttctatct
2821 agttagaatt atgaacatct ggatcatata gctgatgtgt agttacacat atggggagac
2881 acttttgaga gtgtttaagc aatgtatagt ggccatcttt ggttacttga tattggtgtt
2941 gtcaagctcc tgcaaataat agtaaatgtg caaggagatg attggcagtc tttcttgttt
3001 cactttttgg gcaaacagtt ttataaattc atggctgttg agtttttcat gttctgggta
3061 ccacaactat tcaatattga cccccaaaaa ttcataatga gtagtatgat gagataattt
3121 tacattgtct aagcagccta aggacactga gatcaaggca aagagagggc aatttaggtc
3181 tataatgaaa gtgaatcagc agtttttgtg aaaacactaa agacagaaag aaaggactct
3241 acttttttta aaattttctt tgggaagtca ccattattta ttgttatatc tgttggcgta
3301 tgctggggca gcagttagcc aagaggtctg aaattgctct ttgcctattt ctcaaaagtc
3361 tatattatta ccttagaact ggccctacga tcatggaact tagatacagg gacccaggtc
3421 tagatagcag cactttagat cctcagcttt caccacag
//