LOCUS AK292988 904 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77378 complete cds, highly similar to Homo
sapiens alpha-methylacyl-CoA racemase (AMACR), transcript variant
2, mRNA.
ACCESSION AK292988
VERSION AK292988.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 904)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..904
/clone="TRACH3032345"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425785"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 47..643
/codon_start=1
/note="highly similar to Homo sapiens
alpha-methylacyl-CoA racemase (AMACR), transcript variant
2, mRNA"
/protein_id="BAF85677.1"
/transl_table=1
/translation="MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSRYDVS
RLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRL
IYARLSGFGQSGSFCRLAGHDINYLALSGGRNSIFKFFSVENSEIESVGSTSRTEHVG
WWSTFLYDLQDSRWGIHGCWSNRTPFLRAADQRTWTKV"
BASE COUNT 194 a 223 c 280 g 207 t
ORIGIN
1 ttggaagggc tgctcagttt ccttcagcgg ggcactggga agcgccatgg cactgcaggg
61 catctcggtc gtggagctgt ccggcctggc cccgggcccg ttctgtgcta tggtcctggc
121 tgacttcggg gcgcgtgtgg tacgcgtgga ccggcccggc tcccgctacg acgtgagccg
181 cttgggccgg ggcaagcgct cgctagtgct ggacctgaag cagccgcggg gagccgccgt
241 gctgcggcgt ctgtgcaagc ggtcggatgt gctgctggag cccttccgcc gcggtgtcat
301 ggagaaactc cagctgggcc cagagattct gcagcgggaa aatccaaggc ttatttatgc
361 caggctgagt ggatttggcc agtcaggaag cttctgccgg ttagctggcc acgatatcaa
421 ctatttggct ttgtcaggtg gaaggaacag catatttaag ttcttttctg tggaaaactc
481 agaaatcgag tctgtgggaa gcacctcgag gacagaacat gttggatggt ggagcacctt
541 tctatacgac ttacaggaca gcagatgggg aattcatggc tgttggagca atagaacccc
601 atttctacga gctgctgatc aaaggacttg gactaaagtc tgatgaactt cccaatcaga
661 tgagcatgga tgattggcca gaaatgaaga agaagtttgc agatgtattt gcaaagaaga
721 cgaaggcaga gtggtgtcaa atctttgacg gcacagatgc ctgtgtgact ccggttctga
781 cttttgagga ggttgttcat catgatcaca acaaggaacg gggctcgttt atcaccagtg
841 aggagcagga cgtgagcccc cgccctgcac ctctgctgtt aaacacccca gccatccctt
901 cttt
//