LOCUS AK292980 3223 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78687 complete cds, highly similar to Homo
sapiens SCY1-like 2 (SCYL2), mRNA.
ACCESSION AK292980
VERSION AK292980.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3223)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3223
/clone="TRACH3029859"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425777"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 212..3001
/codon_start=1
/note="highly similar to Homo sapiens SCY1-like 2
(SCYL2), mRNA"
/protein_id="BAF85669.1"
/transl_table=1
/translation="MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNG
LAWKIFNGTKKSTKQEVAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLL
TVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQ
VSEGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEW
DPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYK
SFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVT
LQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPN
VLLIAEECTKEEYVKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTPPDEIKNSVL
PMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNS
LVCLGKILEYLDKWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQL
AGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLD
IGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEE
KQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKS
SASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSP
STVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQL
SQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTM
TNSSSASNDLKDLFG"
BASE COUNT 1003 a 648 c 644 g 928 t
ORIGIN
1 agcgagctcc ggggagcgga tccgagaggg ccgagtcctc gaaagaggcc ttgaggcgac
61 gggagacccg ggatcgaagt cagctgccgg agggagagcc ccccatgccg gctcgagagc
121 tcgggtttcg gtggtggaga acgtagtacc tttcggggac attggacact actctaggac
181 cgggtaacta taactaccca atattgcagc catggagtcc atgcttaata aattgaagag
241 tactgttaca aaagtaacag ctgatgtcac tagtgctgta atgggaaatc ctgtcactag
301 agaatttgat gttggtcgac acattgccag tggtggcaat gggctagctt ggaagatttt
361 taatggcaca aaaaagtcaa caaagcagga agtggcagtt tttgtctttg ataaaaaact
421 gattgacaag tatcaaaaat ttgaaaagga tcaaatcatt gattctctaa aacgaggagt
481 ccaacagtta actcggcttc gacaccctcg acttcttact gtccagcatc ctttagaaga
541 atccagggat tgcttggcat tttgtacaga accagttttt gccagtttag ccaatgttct
601 tggtaactgg gaaaatctac cttcccctat atctccagac attaaggatt ataaacttta
661 tgatgtagaa accaaatatg gtttgcttca ggtttctgaa ggattgtcat tcttgcatag
721 cagtgtgaaa atggtgcatg gaaatatcac tcctgaaaat ataattttga ataaaagtgg
781 agcctggaaa ataatgggtt ttgatttttg tgtatcatca accaatcctt ctgaacaaga
841 gcctaaattt ccttgtaaag aatgggaccc aaatttacct tcattgtgtc ttccaaatcc
901 tgaatatttg gctcctgaat acatactttc tgtgagctgt gaaacagcca gtgatatgta
961 ttctttagga actgttatgt atgctgtatt taataaaggg aaacctatat ttgaagtcaa
1021 caagcaagat atttacaaga gtttcagtag gcagttggat cagttgagtc gtttaggatc
1081 tagttcactt acaaatatac ctgaggaagt tcgtgaacat gtaaagctac tgttaaatgt
1141 aactccgact gtaagaccag atgcagatca aatgacaaag attcccttct ttgatgatgt
1201 tggtgcagta acactgcaat attttgatac cttattccaa agagataatc ttcagaaatc
1261 acagtttttc aaaggactgc caaaggttct accaaaactg cccaagcgtg tcattgtgca
1321 gagaattttg ccttgtttga cttcagaatt tgtaaaccct gacatggtac cttttgtttt
1381 gcccaatgtt ctacttattg ctgaggaatg caccaaagaa gaatatgtca aattaattct
1441 tcctgaactt ggccctgtgt ttaagcagca ggagccaatc cagattttgt taattttcct
1501 acaaaaaatg gatttgctac taaccaaaac ccctcctgat gagataaaga acagtgttct
1561 acccatggtt tacagagcac tagaagctcc ttccattcag atccaggagc tctgtctaaa
1621 catcattcca acctttgcaa atcttataga ctacccatcc atgaaaaacg ctttgatacc
1681 aagaattaaa aatgcttgtc tacaaacatc ttcccttgcg gttcgtgtaa attcattagt
1741 gtgcttagga aagattttgg aatacttgga taagtggttt gtacttgatg atatcctacc
1801 cttcttacaa caaattccat ccaaggaacc tgcggtcctc atgggaattt taggtattta
1861 caaatgtact tttactcata agaagttggg aatcaccaaa gagcagctgg ccggaaaagt
1921 gttgcctcat cttattcccc tgagtattga aaacaatctt aatcttaatc agttcaattc
1981 tttcatttcc gtcataaaag aaatgcttaa tagattggag tctgaacata agactaaact
2041 ggagcaactt catataatgc aagaacagca gaaatctttg gatataggaa atcaaatgaa
2101 tgtttctgag gagatgaaag ttacaaatat tgggaatcag caaattgaca aagtttttaa
2161 caacattgga gcagaccttc tgactggcag tgagtccgaa aataaagagg acgggttaca
2221 gaataaacat aaaagagcat cacttacact tgaagaaaaa caaaaattag caaaagaaca
2281 agagcaggca cagaagctga aaagccagca gcctcttaaa ccccaagtgc acacacctgt
2341 tgctactgtt aaacagacta aggacttgac agacacattg atggataata tgtcatcctt
2401 gaccagcctt tctgttagta cccctaaatc ttctgcttca agtactttca cttctgttcc
2461 ttccatgggc attggtatga tgttttctac accaactgat aatacaaaga gaaatttgac
2521 aaatggccta aatgccaata tgggctttca gacttcagga ttcaacatgc ccgttaatac
2581 aaaccagaac ttctacagta gtccaagcac agttggagtg accaagatga ctctgggaac
2641 acctcccact ttgccaaact tcaatgcttt gagtgttcct cctgctggtg caaagcagac
2701 ccaacaaaga cccacagata tgtctgccct taataatctc tttggccctc agaaacccaa
2761 agttagcatg aaccagttat cacaacagaa accaaatcag tggcttaatc agtttgtacc
2821 tcctcaaggt tctccaacta tgggcagttc agtaatgggg acacagatga acgtgatagg
2881 acaatctgct tttggtatgc agggtaatcc tttctttaac ccacagaact ttgcacagcc
2941 accaactact atgaccaata gcagttcagc tagcaatgat ttaaaagatc tttttgggtg
3001 aggtgtctta cttctatttt gaaggattat ttcagtttca atcatgggtg agctgattta
3061 catctttata tagttggctt ggaggaagta cttctatggg aaagtgaaca gttctgtgac
3121 aggaaacatc tctgtccatg ccagcatagt agttgtatgg acttctaacc agttgagttt
3181 tttaaagcat tgaggatttt ttcctcttac caactcctct tca
//