LOCUS AK292980 3223 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ78687 complete cds, highly similar to Homo sapiens SCY1-like 2 (SCYL2), mRNA. ACCESSION AK292980 VERSION AK292980.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3223) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3223 /clone="TRACH3029859" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000425777" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 212..3001 /codon_start=1 /note="highly similar to Homo sapiens SCY1-like 2 (SCYL2), mRNA" /protein_id="BAF85669.1" /transl_table=1 /translation="MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNG LAWKIFNGTKKSTKQEVAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLL TVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQ VSEGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEW DPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYK SFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVT LQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPN VLLIAEECTKEEYVKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTPPDEIKNSVL PMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNS LVCLGKILEYLDKWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQL AGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLD IGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEE KQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKS SASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSP STVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQL SQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTM TNSSSASNDLKDLFG" BASE COUNT 1003 a 648 c 644 g 928 t ORIGIN 1 agcgagctcc ggggagcgga tccgagaggg ccgagtcctc gaaagaggcc ttgaggcgac 61 gggagacccg ggatcgaagt cagctgccgg agggagagcc ccccatgccg gctcgagagc 121 tcgggtttcg gtggtggaga acgtagtacc tttcggggac attggacact actctaggac 181 cgggtaacta taactaccca atattgcagc catggagtcc atgcttaata aattgaagag 241 tactgttaca aaagtaacag ctgatgtcac tagtgctgta atgggaaatc ctgtcactag 301 agaatttgat gttggtcgac acattgccag tggtggcaat gggctagctt ggaagatttt 361 taatggcaca aaaaagtcaa caaagcagga agtggcagtt tttgtctttg ataaaaaact 421 gattgacaag tatcaaaaat ttgaaaagga tcaaatcatt gattctctaa aacgaggagt 481 ccaacagtta actcggcttc gacaccctcg acttcttact gtccagcatc ctttagaaga 541 atccagggat tgcttggcat tttgtacaga accagttttt gccagtttag ccaatgttct 601 tggtaactgg gaaaatctac cttcccctat atctccagac attaaggatt ataaacttta 661 tgatgtagaa accaaatatg gtttgcttca ggtttctgaa ggattgtcat tcttgcatag 721 cagtgtgaaa atggtgcatg gaaatatcac tcctgaaaat ataattttga ataaaagtgg 781 agcctggaaa ataatgggtt ttgatttttg tgtatcatca accaatcctt ctgaacaaga 841 gcctaaattt ccttgtaaag aatgggaccc aaatttacct tcattgtgtc ttccaaatcc 901 tgaatatttg gctcctgaat acatactttc tgtgagctgt gaaacagcca gtgatatgta 961 ttctttagga actgttatgt atgctgtatt taataaaggg aaacctatat ttgaagtcaa 1021 caagcaagat atttacaaga gtttcagtag gcagttggat cagttgagtc gtttaggatc 1081 tagttcactt acaaatatac ctgaggaagt tcgtgaacat gtaaagctac tgttaaatgt 1141 aactccgact gtaagaccag atgcagatca aatgacaaag attcccttct ttgatgatgt 1201 tggtgcagta acactgcaat attttgatac cttattccaa agagataatc ttcagaaatc 1261 acagtttttc aaaggactgc caaaggttct accaaaactg cccaagcgtg tcattgtgca 1321 gagaattttg ccttgtttga cttcagaatt tgtaaaccct gacatggtac cttttgtttt 1381 gcccaatgtt ctacttattg ctgaggaatg caccaaagaa gaatatgtca aattaattct 1441 tcctgaactt ggccctgtgt ttaagcagca ggagccaatc cagattttgt taattttcct 1501 acaaaaaatg gatttgctac taaccaaaac ccctcctgat gagataaaga acagtgttct 1561 acccatggtt tacagagcac tagaagctcc ttccattcag atccaggagc tctgtctaaa 1621 catcattcca acctttgcaa atcttataga ctacccatcc atgaaaaacg ctttgatacc 1681 aagaattaaa aatgcttgtc tacaaacatc ttcccttgcg gttcgtgtaa attcattagt 1741 gtgcttagga aagattttgg aatacttgga taagtggttt gtacttgatg atatcctacc 1801 cttcttacaa caaattccat ccaaggaacc tgcggtcctc atgggaattt taggtattta 1861 caaatgtact tttactcata agaagttggg aatcaccaaa gagcagctgg ccggaaaagt 1921 gttgcctcat cttattcccc tgagtattga aaacaatctt aatcttaatc agttcaattc 1981 tttcatttcc gtcataaaag aaatgcttaa tagattggag tctgaacata agactaaact 2041 ggagcaactt catataatgc aagaacagca gaaatctttg gatataggaa atcaaatgaa 2101 tgtttctgag gagatgaaag ttacaaatat tgggaatcag caaattgaca aagtttttaa 2161 caacattgga gcagaccttc tgactggcag tgagtccgaa aataaagagg acgggttaca 2221 gaataaacat aaaagagcat cacttacact tgaagaaaaa caaaaattag caaaagaaca 2281 agagcaggca cagaagctga aaagccagca gcctcttaaa ccccaagtgc acacacctgt 2341 tgctactgtt aaacagacta aggacttgac agacacattg atggataata tgtcatcctt 2401 gaccagcctt tctgttagta cccctaaatc ttctgcttca agtactttca cttctgttcc 2461 ttccatgggc attggtatga tgttttctac accaactgat aatacaaaga gaaatttgac 2521 aaatggccta aatgccaata tgggctttca gacttcagga ttcaacatgc ccgttaatac 2581 aaaccagaac ttctacagta gtccaagcac agttggagtg accaagatga ctctgggaac 2641 acctcccact ttgccaaact tcaatgcttt gagtgttcct cctgctggtg caaagcagac 2701 ccaacaaaga cccacagata tgtctgccct taataatctc tttggccctc agaaacccaa 2761 agttagcatg aaccagttat cacaacagaa accaaatcag tggcttaatc agtttgtacc 2821 tcctcaaggt tctccaacta tgggcagttc agtaatgggg acacagatga acgtgatagg 2881 acaatctgct tttggtatgc agggtaatcc tttctttaac ccacagaact ttgcacagcc 2941 accaactact atgaccaata gcagttcagc tagcaatgat ttaaaagatc tttttgggtg 3001 aggtgtctta cttctatttt gaaggattat ttcagtttca atcatgggtg agctgattta 3061 catctttata tagttggctt ggaggaagta cttctatggg aaagtgaaca gttctgtgac 3121 aggaaacatc tctgtccatg ccagcatagt agttgtatgg acttctaacc agttgagttt 3181 tttaaagcat tgaggatttt ttcctcttac caactcctct tca //