LOCUS AK292976 3865 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78685 complete cds, highly similar to Homo
sapiens myosin binding protein C, slow type (MYBPC1), transcript
variant 2, mRNA.
ACCESSION AK292976
VERSION AK292976.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3865)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3865
/clone="TRACH3028153"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425773"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 101..3547
/codon_start=1
/note="highly similar to Homo sapiens myosin binding
protein C, slow type (MYBPC1), transcript variant 2, mRNA"
/protein_id="BAF85665.1"
/transl_table=1
/translation="MPEPTKKEENEVPAPAPPPEEPSKEKEAGTTPAKDEEEVSPPSA
LPPGLGSRALERKDSDWTLVETPPGEEQAKQNANSQLSILFIEKPQGGTVKVGEDITF
IAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN
FAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDIRSAFKRSGEGQEDAGELDFSGL
LKRREVKQQEEEPQVDVWELLKNAKPSEYEKIAFQYGITDLRGMLKRLKRMRREEKKS
AAFAKILDPAYQVDKGGRVRFVVELADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRIL
FINNCQMTDDSEYYVTAGDEKCSTELFVREPPIMVTKQLEDTTAYCGERVELECEVSE
DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSAK
LSVDLKPLKILTPLTDQTVNLGKEICLKCEISENIPGKWTKNGLPVQESDRLKVVHKG
RIHKLVIANALTEDEGDYVFAPDAYNVTLPAKVHVIDPPKIILDGLDADNTVTVIAGN
KLRLEIPISGEPPPKTMWSRGDKAIMEGSGRIRTESYPDSSTLVIDIAERDDSGVYHI
NLKNEAGEAHASIKVKVVDFPDPPVAPTVTEVGDDWCIMNWEPPAYDGGSPILGYFIE
RKKKQSSRWMRLNFDLCKETTFEPKKMIEGVAYEVRIFAVNAIGISKPSMPSRPFVPL
AVTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLID
KTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKEIIEPPKIRIPRHLKQTY
IRRVGEAVNLVIPFQGKPRPELTWKKDGAEIDKNQINIRNSETDTIIFIRKAERSHSG
KYDLQVKVDKFVETASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITG
YTIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKES
AVIARDGKIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGYNATPNCSVRGNPKPKITWM
KNKVAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIECKLEVKVI
AQ"
BASE COUNT 1199 a 817 c 947 g 902 t
ORIGIN
1 gtcacaccga cctgcaccat ctctcgcctg cctgtggggt ttctgtcaac tagtcgtgga
61 gggaaggaga ctctttaaag aataacatct tattgtggcc atgccagaac ccactaagaa
121 agaggaaaat gaagtgccag ccccagcccc acccccggaa gaaccaagta aagagaagga
181 ggccggaact acaccagcaa aagatgaaga ggaagtctcc ccgcctagcg ccttgcctcc
241 aggtttgggt agtcgggccc tggagagaaa agattcagac tggacccttg tcgaaactcc
301 tcctggggag gaacaagcca agcagaatgc caactcccag ctgtccatct tgttcattga
361 aaaacctcaa ggaggaacag tgaaagttgg tgaagatatc accttcatag ccaaagtcaa
421 ggctgaagat cttctgagaa aacccactat caaatggttc aaaggaaaat ggatggacct
481 ggccagcaaa gccgggaagc accttcagct gaaggaaacc tttgagaggc acagtcgggt
541 gtacacattt gagatgcaga tcatcaaggc caaagataac tttgcaggaa attacagatg
601 cgaggtcacc tataaggata agtttgacag ctgttcattt gatcttgaag tgcacgaatc
661 tactgggact actccaaaca ttgacatcag atctgctttc aagagaagtg gagaaggtca
721 agaggatgca ggagaacttg actttagtgg tctcctgaaa cgtagggagg tgaagcagca
781 ggaggaagaa ccccaggtgg acgtatggga gttgctgaag aacgcgaaac ccagtgagta
841 cgagaagatc gccttccagt atggaatcac cgacctgcgc ggcatgctca agcgactcaa
901 gcgcatgcgc agagaggaga agaagagcgc agcttttgca aaaattcttg atcctgcata
961 tcaggttgac aaaggaggca gagtgaggtt tgttgtggag ctggcagatc caaagttgga
1021 ggtgaaatgg tataaaaatg gtcaagaaat tcgacccagt accaaataca tctttgaaca
1081 caaaggatgc cagagaatcc tgtttatcaa taactgtcag atgacagatg attcagagta
1141 ttatgtgaca gccggtgatg agaaatgttc cactgagctc ttcgtaagag agcctccaat
1201 tatggtgacc aaacagctgg aagatacaac tgcttattgt ggggagagag tggaattaga
1261 atgtgaggtg tctgaagatg atgccaatgt aaaatggttt aagaatggtg aagagattat
1321 ccctggtcca aaatcaagat accgaattag agttgagggt aaaaaacaca tcttgatcat
1381 agagggagca acaaaggctg atgctgcaga atattcagta atgacaacag gaggacaatc
1441 atctgctaaa cttagtgttg acttgaaacc tctgaagatt ttgacacctc tgactgatca
1501 gactgtaaat cttggaaaag aaatctgcct gaagtgtgaa atctctgaaa acataccagg
1561 aaaatggact aaaaatggcc tacctgttca ggagagtgac cgtctaaagg tggttcacaa
1621 gggaaggatc cacaagttag tgatagccaa tgccctcact gaagatgaag gtgattatgt
1681 atttgcacct gatgcctaca atgttactct gcctgccaaa gttcatgtta ttgatcctcc
1741 taagatcatc ctggatggtc ttgatgctga caacacagtg acagtgattg caggaaacaa
1801 gcttcgtctt gagatcccca tcagcggaga accacctcct aaaaccatgt ggagccgggg
1861 agataaggct attatggaag gcagtggccg gataagaaca gaatcttacc ctgatagcag
1921 cactctggtc attgatatag ctgaaagaga tgactctggt gtttaccaca tcaatctgaa
1981 aaacgaagct ggagaggcac atgcaagcat caaggttaaa gttgtggact tccctgatcc
2041 tccagtggca ccgactgtga cagaggtggg agatgactgg tgtatcatga actgggagcc
2101 tcctgcctac gacggaggct ctccaatcct aggatatttt attgagagga agaagaaaca
2161 aagctccagg tggatgaggc tgaattttga tctctgcaaa gaaacaactt ttgagcccaa
2221 gaagatgatt gaaggtgtgg cctatgaggt ccgcatcttt gcagtcaatg ccattggcat
2281 ctccaagccc agtatgccct ccaggccttt tgttcctttg gctgtaacaa gccctcctac
2341 tcttctgact gtggactctg tcactgacac gactgtcacg atgaggtggc gccccccaga
2401 ccacattggt gcagcaggtt tagatggcta tgtgctagag tattgctttg aaggaactga
2461 ggactggata gttgcaaaca aagatctgat tgacaagacg aagttcacca tcacaggtct
2521 gccaacagat gcaaagatct ttgtgcgtgt gaaggctgtt aatgcagctg gtgccagcga
2581 gcccaagtac tattctcagc ccattctcgt gaaggaaatc atagaacctc caaagattcg
2641 catcccaaga cacctgaagc aaacctatat ccgcagagtt ggagaagctg tcaatctggt
2701 tatacctttc cagggaaaac caagaccaga attaacttgg aagaaggatg gtgcagaaat
2761 tgataagaat caaataaaca ttcgcaactc tgagactgat acaatcatat ttattagaaa
2821 agcagagagg agccactctg ggaaatatga tctgcaagtc aaagtggaca aattcgtgga
2881 gaccgcatca attgacatcc agatcattga ccgtccgggt ccaccccaaa ttgtgaagat
2941 tgaggatgtc tggggagaaa atgtcgctct cacatggact ccaccaaagg atgatggaaa
3001 tgctgctatc acaggctata ccattcagaa ggctgacaag aagagcatgg aatggtttac
3061 tgtcattgag cattatcatc gaaccagtgc caccattact gaattggtca tagggaatga
3121 atattacttc cgggtctttt ctgaaaacat gtgtggcctc agtgaggatg ccaccatgac
3181 taaagagagt gcagtgatcg ccagggatgg taaaatctac aaaaatccag tgtatgaaga
3241 ctttgatttc tcagaggcac ccatgtttac tcagcctttg gttaacacct atgccatagc
3301 tggttacaat gccaccccaa actgcagtgt gagaggaaat cctaagccta aaataacctg
3361 gatgaaaaac aaagttgcta ttgtggatga tccaagatac aggatgttca gcaaccaggg
3421 agtctgtacc ctggaaattc gcaagcccag cccctatgat ggaggcactt actgctgcaa
3481 agcagtcaat gaccttggga cagtggagat tgaatgcaaa ctggaggtga aagtcattgc
3541 acaataagga tttttgaatg tataatatca tctaaggtgg gctctccttc tgcagactcc
3601 tcttgcaagg cgtacctcca aacataattg attcatatct gcgagactta cactcaagca
3661 atcctgagga atactgaggg agggcctggc tactgtctct ctgcactctg ctgctttgaa
3721 atctggttga aatgagaaaa agcattttct gttttcccac caggccccca agtgtggtct
3781 ttttctttcc tcctaatgtt gaagagaaaa aaaaaaaaaa aaagtttgcc cagattgctt
3841 aattaaaaat tgcaaacaaa atctc
//