LOCUS AK292927 3594 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78657 complete cds, highly similar to Homo
sapiens ankyrin 3, node of Ranvier (ankyrin G) (ANK3), transcript
variant 2, mRNA.
ACCESSION AK292927
VERSION AK292927.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3594)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3594
/clone="TRACH3021811"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425724"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 536..3538
/codon_start=1
/note="highly similar to Homo sapiens ankyrin 3, node of
Ranvier (ankyrin G) (ANK3), transcript variant 2, mRNA"
/protein_id="BAF85616.1"
/transl_table=1
/translation="MALPQSEDAMTGDTDKYLGPQDLKELGDDSLPAEGYMGFSLGAR
SASLRSFSSDRSYTLNRSSYARDSMMIEELLVPSKEQHLTFTREFDSDSLRHYSWAAD
TLDNVNLVSSPIHSGFLVSFMVDARGGSMRGSRHHGMRIIIPPRKCTAPTRITCRLVK
RHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVIVEIPHFGSMRGKERELIVLRSEN
GETWKEHQFDSKNEDLTELLNGMDEELDSPEELGKKRICRIITKDFPQYFAVVSRIKQ
ESNQIGPEGGILSSTTVPLVQASFPEGALTKRIRVGLQAQPVPDEIVKKILGNKATFS
PIVTVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDTTPNLRLLCSITGGTSPAQWE
DITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLATQLYRELICVPYMAKFVV
FAKMNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARSKDIEVLEGKPIYVDCYGNLA
PLTKGGQQLVFNFYSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKTTKGLPQTAVCNL
NITLPAHKKIEKTDRRQSFASLALRKRYSYLTEPGMSPQSPCERTDIRMAIVADHLGL
SWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKI
NRIDIVTLLEGPIFDYGNISGTRSFADENNVFHDPVDGYPSLQVELETPTGLHYTPPT
PFQQDDYFSDISSIESPLRTPSRLSDGLVPSQGNIEHSADGPPVVTAEDASLEDSKLE
DSVPLTEMPEAVDVDESQLENVCLSWQNETSSGNLESCAQARRVTGGLLDRLDDSPDQ
CRDSITSYLKGEAGKFEANGSHTEITPEAKTKSYFPESQNDVGKQSTKETLKPKIHGS
GHVEEPASPLAAYQKSLEETSKLIIEETKPCVPVSMKKMSRTSPADGKPRLSLHEEEG
SSGSEQKGEGFKVKTKKEIRHVEKKSHS"
BASE COUNT 1119 a 752 c 838 g 885 t
ORIGIN
1 atatttgaga agaatcacct cctaattaaa tgtagcactt cgctctctcc ctacatgaag
61 gctgtcttgg ttacccgact aggcaacgcg cattggtatc aaattaccga aagtctacac
121 cggagcagtc ctcatattta catacaaata actcaggggc ttgcatttat gtcaccattc
181 tgtcctgcta gaggcttgcc agaggagttt ttaatccaat cagaaggagc tttaaaagga
241 tgtctgcgaa gtggtcaaaa ggatcttaac ctcaattaag tggggttttt taaaaagatt
301 ttttgggggg cctgaaattt tgaaaatctt cgaactctga gtggggaaag atgtataatt
361 cctcaattgc ctacgaggat atcaagatgc tgagaggaat tcagcggtgg tgaagagagt
421 ggatacaaac cagggattgg tttccttgag ctgttttgga ggttgattct aaatcactgc
481 ttaaggaatt cctggaaaca tcaggaaaac atttgatcat ccaagcctag tggaaatggc
541 tttaccgcag agtgaagatg caatgaccgg ggacacagac aaatatcttg ggccacagga
601 ccttaaggaa ttgggtgatg attccctgcc tgcagagggt tacatgggct ttagtctcgg
661 agcgcgttct gccagcctcc gctccttcag ttcggatagg tcttacacct tgaacagaag
721 ctcctatgca cgggacagca tgatgattga agaactcctt gtgccatcca aagagcagca
781 tctaacattc acaagggaat ttgattcaga ttctcttaga cattacagct gggctgcaga
841 caccttagac aatgtcaatc ttgtttcaag ccccattcat tctgggtttc tggttagctt
901 tatggtggac gcgagagggg gctccatgag aggaagccgt catcacggga tgagaatcat
961 cattcctcca cgcaagtgta ctgcccccac tcgaatcacc tgccgtttgg taaagagaca
1021 taaactggcc aacccacccc ccatggtgga aggagaggga ttagccagta ggctggtaga
1081 aatgggtcct gcaggggcac aatttttagg ccctgtcata gtggaaatcc ctcactttgg
1141 gtccatgaga ggaaaagaga gagaactcat tgttcttcga agtgaaaatg gtgaaacttg
1201 gaaggagcat cagtttgaca gcaaaaatga agatttaacc gagttactta atggcatgga
1261 tgaagaactt gatagcccag aagagttagg gaaaaagcgt atctgcagga ttatcacgaa
1321 agatttcccc cagtattttg cagtggtttc ccggattaag caggaaagca accagattgg
1381 tcctgaaggt ggaattctga gcagcaccac agtgcccctt gttcaagcat ctttcccaga
1441 gggtgcccta actaaaagaa ttcgagtggg cctccaggcc cagcctgttc cagatgaaat
1501 tgtgaaaaag atccttggaa acaaagcaac ttttagccca attgtcactg tggaaccaag
1561 aagacggaaa ttccataaac caatcacaat gaccattccg gtgcccccgc cctcaggaga
1621 aggtgtatcc aatggataca aaggggacac tacacccaat ctgcgtcttc tctgtagcat
1681 tacagggggc acttcgcctg ctcagtggga agacatcaca ggaacaactc ctttgacgtt
1741 tataaaagat tgtgtctcct ttacaaccaa tgtttcagcc agattttggc ttgcagactg
1801 ccatcaagtt ttagaaactg tggggttagc cacgcaactg tacagagaat tgatatgtgt
1861 tccatatatg gccaagtttg ttgtttttgc caaaatgaat gatcccgtag aatcttcctt
1921 gcgatgtttc tgcatgacag atgacaaagt ggacaaaact ttagagcaac aagagaattt
1981 tgaggaagtc gcaagaagca aagatattga ggttctggaa ggaaaaccta tttatgttga
2041 ttgttatgga aatttggccc cacttaccaa aggaggacag caacttgttt ttaactttta
2101 ttctttcaaa gaaaatagac tgccattttc catcaagatt agagacacca gccaagagcc
2161 ctgtggtcgt ctgtcttttc tgaaagaacc aaagacaaca aaaggactgc ctcaaacagc
2221 ggtttgcaac ttaaatatca ctctgccagc acataaaaag attgagaaaa cagatagacg
2281 acagagcttc gcatccttag ctttacgtaa gcgctacagc tacttgactg agcctggaat
2341 gagtccacag agtccatgtg aacggacaga tatcaggatg gcaatagtag ccgatcacct
2401 gggacttagt tggacagaac tggcaaggga actgaatttt tcagtggatg aaatcaatca
2461 aatacgtgtg gaaaatccaa attctttaat ttctcagagc ttcatgttat taaaaaaatg
2521 ggttaccaga gacggaaaaa atgccacaac tgatgcctta acttcggtct tgacaaaaat
2581 taatcgaata gatatagtga cactgctaga aggaccaata tttgattatg gaaatatttc
2641 aggcaccaga agttttgcag atgagaacaa tgttttccat gaccctgttg atggttatcc
2701 ttcccttcaa gtggaactgg aaacccccac agggttgcac tacacaccac ctaccccttt
2761 ccagcaagat gattatttta gtgatatctc tagcatagaa tctcccctta gaacccctag
2821 tagactgagt gatgggctag tgccttccca ggggaacata gagcattccg cagatggacc
2881 tccagtcgta actgcagaag acgcttcctt agaagacagc aaactggaag actcagtgcc
2941 tttaacagaa atgcctgaag cagtggatgt agatgagagc cagttggaga atgtatgtct
3001 gagttggcag aatgagacat caagtggaaa cctagagtcc tgcgctcaag ctcgaagagt
3061 aactggtggg ttactagatc gactggatga cagccctgac cagtgtagag attccattac
3121 ctcatatctc aaaggagaag ctggcaaatt tgaagcaaat ggaagccata cagaaatcac
3181 tccagaagca aagacaaaat cttactttcc agaatcccaa aatgatgtag gaaaacagag
3241 taccaaggaa actctgaaac caaaaataca tggatctggt catgttgaag aaccagcatc
3301 accactagca gcatatcaga aatctctaga agaaaccagc aagcttataa tagaagagac
3361 taaaccctgt gtgcctgtca gtatgaaaaa gatgagtagg acttctccag cagatggcaa
3421 gccaaggctt agcctccatg aagaagaggg gtccagtggg tctgagcaaa agggagaagg
3481 ttttaaggtg aaaacgaaga aagaaatccg gcatgtggaa aagaagagcc actcgtaaca
3541 gcgaacggtc agtcaaggat cataagtttt tactgccagt attgagaaat tcgt
//