LOCUS AK292915 3847 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78617 partial cds.
ACCESSION AK292915
VERSION AK292915.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3847)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3847
/clone="TRACH3019512"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425712"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 48..>3847
/codon_start=1
/protein_id="BAF85604.1"
/transl_table=1
/translation="MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSH
FSMLSRHLPNLQTHKENPVLDVVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSN
LDTCGSISQVIEQLPQPNRTSSVLGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTT
HSLGAEDTASSQLGFGVLELSQSQDVEENTVPYEVDKEQLQSVTTNSGYTRLSDVDAN
TAIKHEEQSNEDIPIAEQSSKDIPVTAQPSKDVHVVKEQNPPPARSEDMPFSPKASVA
AMEAKEQLPAQELMESGLQIQKSPEPEVLSTQEDLFDQSNKTVSSDGCSTPSREEGGC
SLASTPATTLHLLQLSGQRSLVQDSLSTNSSDLVAPSPDAFRSTPFIVPSSPTEQEGR
QDKPMDTSVLSEEGGEPFQKKLQSGEPVELENPPLLPESTVSPQASTPISQSTPVFPP
GSLPIPSQPQFSHDIFIPSPSLEEQSNDGKKDGDMHSSSLTVECSKTSEIEPKNSPED
LGLSLTGDSCKLMLSTSEYSQSPKMESLSSHRIDEDGENTQIEDTEPMSPVLNSKFVP
AENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRDDISILATGCKGREETVAEDVCIDL
TCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHPEEGSSGSEVEEIPETPCESQGE
ELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEAMEVETSVISIDSPQKLAILD
QELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPLEGVEKCSDSQSWEDIAPE
IEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSLPLVRADDPLRLDQELQ
QPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSFCESSSETPFHFTLP
KEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDVMSESMVETHDPI
LGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGERKNGSTAVAES
VASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKEKLEGDHTI
RQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTNKENPSK
ALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDATVQTE
RGSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVITDV
YYVDG"
BASE COUNT 1168 a 830 c 953 g 896 t
ORIGIN
1 gagcgtgcag agacctctag ctcgagcgcg agggacctcc cgccgggatg cctggggagc
61 agatggaccc tactggaagt cagttggatt cagatttctc tcagcaagat actccttgcc
121 tgataattga agattctcag cctgaaagcc aggttctaga ggatgattct ggttctcact
181 tcagtatgct atctcgacac cttcctaatc tccagacgca caaagaaaat cctgtgttgg
241 atgttgtgtc caatcctgaa caaacagctg gagaagaacg aggagacggt aatagtgggt
301 tcaatgaaca tttgaaagaa aacaaggttg cagaccctgt ggattcttct aacttggaca
361 catgtggttc catcagtcag gtcattgagc agttacctca gccaaacagg acaagcagtg
421 ttctgggaat gtcagtggaa tctgctcctg ctgtggagga agagaaggga gaagagttgg
481 aacagaagga gaaagagaag gaagaagata cttcaggcaa tactacacat tcccttggtg
541 ctgaagatac tgcctcatca cagttgggtt ttggggttct ggaactctcc cagagccagg
601 atgttgagga aaatactgtg ccatatgaag tggacaaaga gcagctacaa tcagtaacca
661 ccaactctgg ttataccagg ctgtctgatg tggatgctaa tactgcaatt aagcatgaag
721 aacagtccaa cgaagatatc cccatagcag aacagtccag caaggacatc cctgtgacag
781 cacagcccag taaggatgta catgttgtaa aagagcaaaa tccaccacct gcaaggtcag
841 aggacatgcc ttttagcccc aaagcatctg ttgctgctat ggaagcaaaa gaacagttgc
901 ctgcacaaga acttatggaa agtggactgc agattcagaa gtcaccagag cctgaggttt
961 tgtcaactca ggaagacttg tttgaccaga gcaataaaac agtatcttct gatggttgct
1021 ctactccttc aagggaggaa ggtgggtgtt ctttggcttc cactcctgcc accactctgc
1081 atctcctgca gctctctggt cagaggtccc ttgttcagga cagtctttcc acgaattctt
1141 cagatcttgt tgctccttct cctgatgctt tccgatctac tccttttatc gttcctagca
1201 gtcccacaga gcaagaaggg agacaagata agccaatgga cacgtcagtg ttatctgaag
1261 aaggaggaga gccttttcag aagaaacttc aaagtggtga accagtggag ttagaaaacc
1321 cccctctcct gcctgagtcc actgtatcac cacaagcctc aacaccaata tctcagagca
1381 caccagtctt ccctcctggg tcacttccta tcccatccca gcctcagttt tctcatgaca
1441 tttttattcc ttccccaagt ctggaagaac aatcaaatga tgggaagaaa gatggagata
1501 tgcatagttc atctttgaca gttgagtgtt ctaaaacttc agagattgaa ccaaagaatt
1561 cccctgagga tcttgggcta tctttgacag gggattcttg caagttgatg ctttctacaa
1621 gtgaatatag tcagtcccca aagatggaga gcttgagttc tcacagaatt gatgaagatg
1681 gagaaaacac acagattgag gatacggaac ccatgtctcc agttctcaat tctaaatttg
1741 ttcctgctga aaatgatagt atcctgatga atccagcaca ggatggtgaa gtacaactga
1801 gtcagaatga tgacaaaaca aagggagatg atacagacac cagggatgac attagtattt
1861 tagccactgg ttgcaagggc agagaagaaa cggtagcaga agatgtttgt attgatctca
1921 cttgtgattc ggggagtcag gcagttccgt caccagctac tcgatctgag gcactttcta
1981 gtgtgttaga tcaggaggaa gctatggaaa ttaaagaaca ccatccagag gaggggtctt
2041 cagggtctga ggtggaagaa atccctgaga caccttgtga aagtcaagga gaggaactca
2101 aagaagaaaa tatggagagt gttccgttgc acctttctct gactgaaact cagtcccaag
2161 ggttgtgtct tcaaaaggaa atgccaaaaa aagaatgctc agaagctatg gaagttgaaa
2221 ccagtgtgat tagtattgat tcccctcaaa agttggcaat acttgaccaa gaattggaac
2281 ataaggaaca ggaagcttgg gaagaagcta cttcagagga ctccagtgtt gtcattgtag
2341 atgtgaaaga gccatctccc agagttgatg tttcttgtga acctttggag ggagtggaga
2401 agtgctcaga ttcccagtca tgggaggata ttgctccaga aatagaacca tgtgctgaga
2461 atagattaga caccaaggaa gaaaagagtg tagaatatga aggagatctg aaatcaggga
2521 ctgcagaaac agaacctgta gagcaagatt cttcacagcc ttccttacct ttagtgagag
2581 cagatgatcc tttaagactt gaccaggagt tgcagcagcc ccaaactcag gagaaaacaa
2641 gtaattcatt aacagaagac tcaaaaatgg ctaatgcaaa gcagctaagc tcagatgcag
2701 aggcccagaa gctggggaag ccctctgccc atgcctcaca aagcttctgt gaaagttcta
2761 gtgaaacccc atttcatttc actttgccta aagaaggtga tatcatccca ccattgactg
2821 gtgcaacccc acctcttatt gggcacctaa aattggagcc caagagacac agtactccta
2881 ttggtattag caactatcca gaaagcacca tagcaaccag tgatgtcatg tctgaaagca
2941 tggtggagac ccatgatccc atacttggga gtggaaaagg ggattctggg gctgccccag
3001 acgtggatga taaattatgt ctaagaatga aactggttag tcctgagact gaggcgagtg
3061 aagagtcttt gcagtttaac ctggaaaagc ctgcaactgg tgaaagaaaa aatggatcta
3121 ctgctgttgc tgagtctgtt gccagtcccc agaagaccat gtctgtgttg agctgtatct
3181 gtgaagccag gcaagagaat gaggctcgaa gtgaggatcc ccccaccaca cccatcaggg
3241 ggaacttgct ccactttcca agttctcaag gagaagagga gaaagaaaaa ttggagggtg
3301 accatacaat caggcagagt caacagccta tgaagcccat tagtcctgtc aaggaccctg
3361 tttctcctgc ttcccagaag atggtcatac aagggccatc cagtcctcaa ggagaggcaa
3421 tggtgacaga tgtgctagaa gaccagaaag aaggacggag tactaataag gaaaatccta
3481 gtaaggcctt gattgaaagg cccagccaaa ataacatagg aatccaaacc atggagtgtt
3541 ccttgagggt cccagaaact gtttcagcag caacccagac tataaagaat gtgtgtgagc
3601 aggggaccag tacagtggac cagaactttg gaaagcaaga tgccacagtt cagactgaga
3661 gggggagtgg tgagaaacca gtcagtgctc ctggggatga tacagagtcg ctccatagcc
3721 agggagaaga agagtttgat atgcctcagc ctccacatgg ccatgtctta catcgtcaca
3781 tgagaacaat ccgggaagta cgcacacttg tcactcgtgt cattacagat gtgtattatg
3841 tggatgg
//