LOCUS AK292913 2646 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77556 complete cds, highly similar to Homo
sapiens cyclin T2 (CCNT2), transcript variant b, mRNA.
ACCESSION AK292913
VERSION AK292913.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2646)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2646
/clone="TRACH3019156"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425710"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 26..2218
/codon_start=1
/note="highly similar to Homo sapiens cyclin T2 (CCNT2),
transcript variant b, mRNA"
/protein_id="BAF85602.1"
/transl_table=1
/translation="MASGRGASSRWFFTREQLENTPSRRCGVEADKELSCRQQAANLI
QEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEH
VIKVAHACLHPLEPLLDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCT
QLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGK
HWWEYVDPTVTLELLDELTHEFLQILEKTPNRLKKIRNWRANQAARKPKVDGQVSETP
LLGSSLVQNSILVDSVTGVPTNPSFQKPSTSAFPAPVPLNSGNISVQDSHTSDNLSML
ATGMPSTSYGLSSHQEWPQHQDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLHSG
LHHRPDKISDHSSVKQEYTHKAGSSKHHGPISTTPGIIPQKMSLDKYREKRKLETLDL
DVRDHYIAAQVEQQHKQGQSQAASSSSVTSPIKMKIPIANTEKYMADKKEKSGSLKLR
IPIPPTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKEKHKEHPSS
RHHTSSHKHSHSHSGSSSGGSKHSADGIPPTVLRSPVGLSSDGISSSSSSSRKRLHVN
DASHNHHSKMSKSSKSSGSSSSSSSSVKQYISSHNSVFNHPLPPPPPVTYQVGYGHLS
TLVKLDKKPVETNGPDANHEYSTSSQHMDYKDTFDMLDSLLSAQGMNM"
BASE COUNT 833 a 587 c 533 g 693 t
ORIGIN
1 aggagcgggc ggaggaggaa gtgtcatggc gtcgggccgt ggagcttctt ctcgctggtt
61 ctttactcgg gaacagctgg agaacacgcc gagccgccgc tgcggagtgg aggcggataa
121 agagctctcg tgccgccagc aggcggccaa cctcatccag gagatgggac agcgtctcaa
181 tgtctctcag cttacaataa acactgcgat tgtttatatg cacaggtttt atatgcacca
241 ttctttcacc aaattcaaca aaaatataat atcgtctact gcattatttt tggctgcaaa
301 agtggaagaa caggctcgaa aacttgaaca tgttatcaaa gtagcacatg cttgtcttca
361 tcctctagag ccactgctgg atactaaatg tgatgcttac cttcaacaga ctcaagaact
421 ggttatactt gaaaccataa tgctacaaac tctaggtttt gagatcacca ttgaacaccc
481 acacacagat gtggtgaaat gtacccagtt agtaagagca agcaaggatt tggcacagac
541 atcctatttc atggctacca acagtctgca tcttacaacc ttctgtcttc agtacaaacc
601 aacagtgata gcatgtgtat gcattcattt ggcttgcaaa tggtccaatt gggagatccc
661 tgtatcaact gatggaaagc attggtggga atatgtggat cctacagtta ctctagaatt
721 attagatgag ctaacacatg agtttctaca aatattggag aaaacgccta ataggttgaa
781 gaagattcga aactggaggg ctaatcaggc agctaggaaa ccaaaagtag atggacaggt
841 atcagagaca ccacttcttg gttcatcttt ggtccagaat tccattttag tagatagtgt
901 cactggtgtg cctacaaacc caagttttca gaaaccatct acatcagcat tccctgcgcc
961 agtacctcta aattcaggaa atatttctgt tcaagacagc catacatctg ataatttgtc
1021 aatgctagca acaggaatgc caagtacttc atacggttta tcatcacacc aggaatggcc
1081 tcaacatcaa gactcagcaa ggacagaaca gctatattca cagaaacagg agacatcttt
1141 gtctggtagc cagtacaaca tcaacttcca gcagggacct tctatatcac tgcattcagg
1201 attacatcac agacctgaca aaatttcaga tcattcttct gttaagcaag aatatactca
1261 taaagcaggg agcagtaaac accatgggcc aatttccact actccaggaa taattcctca
1321 gaaaatgtct ttagataaat atagagaaaa gcgtaaacta gaaactcttg atctcgatgt
1381 aagggatcat tatatagctg cccaggtaga acagcagcac aaacaagggc agtcacaggc
1441 agccagcagc agttctgtta cttctcccat taaaatgaaa atacctatcg caaatactga
1501 aaaatacatg gcagacaaaa aggaaaagag tgggtcactg aaattacgga ttccaatacc
1561 acccactgat aaaagcgcca gtaaagaaga actgaaaatg aaaataaaag tttcttcttc
1621 agaaagacac agctcttctg atgaaggcag tgggaagagc aaacattcaa gcccacatat
1681 tagcagagac cataaggaga agcacaagga gcatccttca agccgccacc acaccagcag
1741 ccacaagcat tcccactcgc atagtggcag cagcagcggt ggcagtaaac acagtgccga
1801 cggaatacca cccactgttc tgaggagtcc tgttggcctg agcagtgatg gcatttcctc
1861 tagctccagc tcttcaagga agaggctgca tgtcaatgat gcatctcaca accaccactc
1921 caaaatgagc aaaagttcca aaagttcagg tagttcatct agttcttcct cctctgttaa
1981 gcagtatata tcctctcaca actctgtttt taaccatccc ttaccccctc ctccccctgt
2041 cacataccag gtgggctacg gacatctcag caccctcgtg aaactggaca agaagccagt
2101 ggagaccaac ggtcctgatg ccaatcacga gtacagtaca agcagccagc atatggacta
2161 caaagacaca ttcgacatgc tggactcact gttaagtgcc caaggaatga acatgtaata
2221 atttgtttag gtcaattttt cctttacttt tttaatttaa aaattgttag aatggaaaaa
2281 ttccttctga tctagcagtg gtaacccctg ctgttgctgc cactgcttca atatttgtaa
2341 gtgctgcttt attcttcatt ctgaaaagaa gagattatag taaacaagtc tttatctcca
2401 catatgatag tgttataaat actgtaaaag catggaaggt gcaaaactca gtatttctac
2461 aattgcagct aagaacatta ggatgaatgg ctggctgctt ctaggaatat aagatgcctc
2521 aagcattcat tatttatgat ttgaatactg tagctatttt ttgttgcttg gcttttgaat
2581 gagtgtaaat tgttttcttt tgtgtattta tacttgtatg tatgatttgc atgtttcaat
2641 gataaa
//