LOCUS AK292912 1938 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77305 complete cds, highly similar to Homo
sapiens copine III (CPNE3), mRNA.
ACCESSION AK292912
VERSION AK292912.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1938)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1938
/clone="TRACH3019153"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425709"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 153..1766
/codon_start=1
/note="highly similar to Homo sapiens copine III (CPNE3),
mRNA"
/protein_id="BAF85601.1"
/transl_table=1
/translation="MAAQCVTKVALNVSCANLLDKDIGSKSDPLCVLFLNTSGQQWYE
VERTERIKNCLNPQFSKTFIIDYYFEVVQKLKFGVYDIDNKTIELSDDDFLGECECTL
GQIVSSKKLTRPLVMKTGRPAGKGSITISAEEIKDNRVVLFEMEARKLDNKDLFGKSD
PYLEFHKQTSDGNWLMVHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYD
NDGSHDLIGTFQTTMTKLKEASRSSPVEFECINEKKRQKKKSYKNSGVISVKQCEITV
ECTFLDYIMGGCQLNFTVGVDFTGSNGDPRSPDSLHYISPNGVNEYLTALWSVGLVIQ
DYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLY
GPTNFSPIINHVARFAAAAMQQQTASQYFVLLIITDGVITDLDETRQAIVNASRLPMS
IIIVGVGGADFSAMEFLDGDGGSLRSPLGEVAIRDIVQFVPFRQFQNAPKEALAQCVL
AEIPQQVVGYFNTYKLLPPKNPATKQQKQ"
BASE COUNT 552 a 412 c 426 g 548 t
ORIGIN
1 agtccagccc taggttctcc tgaatccctg cggtcccagc gtcgctccgg acgctgccaa
61 cctgttctcc accgtcgctc gacttccacc tctaagactc ccacgaaact caggttgaat
121 aattcatcaa attacacaac tgaactcaag acatggctgc ccagtgtgtc acaaaggtgg
181 cgctgaatgt ttcctgtgcc aatcttttgg ataaagatat agggtcaaag tcagaccctt
241 tatgtgtgtt atttttgaat acaagtggtc aacagtggta tgaggttgag cgcacagaaa
301 ggattaagaa ttgcttgaat ccccaatttt ccaagacatt tattattgat tactactttg
361 aagtggttca gaaattgaaa tttggggttt atgacatcga caacaaaact attgagctga
421 gtgatgatga cttcttaggg gaatgtgaat gtacccttgg acaaattgtt tccagcaaga
481 agctaactcg accactggtg atgaaaactg gcaggcctgc aggaaaaggg agcattacga
541 tttcagctga agaaataaaa gataatagag tggtcttgtt tgaaatggaa gccagaaaac
601 tggataataa ggatctattt ggaaagtcag acccatacct ggaattccac aagcagacat
661 ctgatggaaa ctggctaatg gttcatcgga cagaggttgt taaaaacaac ttgaatcctg
721 tttggaggcc tttcaagatc tctcttaact cactgtgtta cggagatatg gacaaaacca
781 ttaaggtgga gtgttatgat tatgacaatg atgggtcaca tgatctcatt ggaacatttc
841 agaccaccat gacaaaactg aaagaagcct ccagaagctc acctgttgaa tttgaatgca
901 taaatgagaa aaaaaggcaa aagaaaaaaa gctacaagaa ttcaggtgtt atcagtgtga
961 aacagtgtga gattacagta gaatgcacat tccttgacta tataatggga ggatgtcagc
1021 tgaattttac tgtgggagtg gacttcactg gctccaatgg tgacccaagg tctccagact
1081 cccttcatta catcagcccc aatggcgtta atgagtattt gactgctctc tggtctgtgg
1141 gactggtcat tcaagattat gatgctgata agatgtttcc agcttttggt tttggcgctc
1201 agatacctcc tcagtggcag gtatcacatg aatttccaat gaacttcaac ccatccaatc
1261 cctactgcaa tggaatccaa ggcattgtag aggcgtatcg gtcttgtctt cctcagataa
1321 aactctatgg accaactaat ttttctccaa tcataaatca cgtggccagg tttgctgctg
1381 cagccatgca acagcagaca gcttctcaat attttgtgct tttgattatt actgatggtg
1441 tgatcacaga ccttgatgaa accagacaag ctatagttaa tgcctccagg ctgcctatgt
1501 ccatcataat tgttggagtt ggaggtgctg acttcagcgc catggagttt ctggatggtg
1561 atggtggaag tctccgctcc ccattgggcg aagtggccat cagagatatt gtccagtttg
1621 tgcctttcag acagttccag aatgctccaa aagaagcact tgctcagtgt gtcttggcag
1681 agattcccca gcaggtggtg ggctacttca atacatacaa actccttcct cccaagaacc
1741 cagccacgaa acaacagaag cagtgaccac ttcaacagaa ttcttttgtg ttctgtggag
1801 caatgccatc tctcacccca aatcgtgtat ctgtcattct acgtactttt taccctcagc
1861 atttatgatg taaatctctt tctctatgga ttatatctgt ttaaagcatt ctttctaggt
1921 tattttgggg ggacagtg
//