LOCUS AK292885 3443 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78477 complete cds, highly similar to Homo
sapiens myocardin mRNA, complete cds.
ACCESSION AK292885
VERSION AK292885.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3443)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3443
/clone="TRACH3015055"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425682"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 169..3129
/codon_start=1
/note="highly similar to Homo sapiens myocardin mRNA,
complete cds"
/protein_id="BAF85574.1"
/transl_table=1
/translation="MTLLGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKR
PAEFHEQRKHLDSDKAKNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRA
RLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSD
GLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQS
DAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE
KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNP
NSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSG
TKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFG
STSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPS
ELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFL
AASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVL
SSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQV
CTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHS
SDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMTRSQQMDELLDVLIESGEM
PADAREDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGSQIPFDPYATDSDEHLE
VLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMDGFSGKAAEDLFNAHEILPGPLSPMQT
QFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNSTPGFSALTTSSPSIFNIDFLDVTD
LNLNSSMDLHLQQW"
BASE COUNT 935 a 988 c 773 g 747 t
ORIGIN
1 agttttctgg ggacactggc tgccactgta ctcctaccca ggggagctca cggagagttg
61 gatgaattct gggttgttag ctgcggtcag ctgggctccc gggaacctgt tgctggtgga
121 gaacaggggg cgcctggcca agggaccagc ggcttgctga gactcaacat gacactcctg
181 gggtctgagc attccttgct gattaggagc aagttcagat cagttttaca gttaagactt
241 caacaaagaa ggacccagga acaactggct aaccaaggca taataccacc actgaaacgt
301 ccagctgaat tccatgagca aagaaaacat ttggatagtg acaaggctaa aaattccctg
361 aagcgcaaag ccagaaacag gtgcaacagt gccgacttgg ttaatatgca catactccaa
421 gcttccactg cagagaggtc cattccaact gctcagatga agctgaaaag agcccgactc
481 gccgatgatc tcaatgaaaa aattgctcta cgaccagggc cactggagct ggtggaaaaa
541 aacattcttc ctgtggattc tgctgtgaaa gaggccataa aaggtaacca ggtgagtttc
601 tccaaatcca cggatgcttt tgcctttgaa gaggacagca gcagcgatgg gctttctccg
661 gatcagactc gaagtgaaga cccccaaaac tcagcgggat ccccgccaga cgctaaagcc
721 tcagataccc cttcgacagg ttctctgggg acaaaccagg atcttgcttc tggctcagaa
781 aatgacagaa atgactcagc ctcacagccc agccaccagt cagatgcggg gaagcagggg
841 cttggccccc ccagcacccc catagccgtg catgctgctg taaagtccaa atccttgggt
901 gacagtaaga accgccacaa aaagcccaag gaccccaagc caaaggtgaa gaagcttaaa
961 tatcaccagt acattccccc agaccagaag gcagagaagt cccctccacc tatggactca
1021 gcctacgctc ggctgctcca gcaacagcag ctgttcctgc agctccaaat cctcagccag
1081 cagcagcagc agcagcaaca ccgattcagc tacctaggga tgcaccaagc tcagcttaag
1141 gaaccaaatg aacagatggt cagaaatcca aactcttctt caacgccact gagcaatacc
1201 cccttgtctc ctgtcaaaaa cagtttttct ggacaaactg gtgtctcttc tttcaaacca
1261 ggcccactcc cacctaacct ggatgatctg aaggtctctg aattaagaca acagcttcga
1321 attcggggct tgcctgtgtc aggcaccaaa acggctctca tggaccggct tcgacccttc
1381 caggactgct ctggcaaccc agtgccgaac tttggggata taacgactgt cacttttcct
1441 gtcacaccca acacgctgcc caattaccag tcttcctctt ctaccagtgc cctgtccaac
1501 ggcttctacc actttggcag caccagctcc agccccccga tctccccagc ctcctctgac
1561 ctgtcagtcg ctgggtccct gccggacacc ttcaatgatg cctccccctc cttcggcctg
1621 cacccgtccc cagtccacgt gtgcacggag gaaagtctca tgagcagcct gaatgggggc
1681 tctgttcctt ctgagctgga tgggctggac tccgagaagg acaagatgct ggtggagaag
1741 cagaaggtga tcaatgaact cacctggaaa ctccagcaag agcagaggca ggtggaggag
1801 ctgaggatgc agcttcagaa gcagaaaagg aataactgtt cagagaagaa gccgctgcct
1861 ttcctggctg cctccatcaa gcaggaagag gctgtctcca gctgtccttt tgcatcccaa
1921 gtacctgtga aaagacaaag cagcagctca gagtgtcacc caccggcttg tgaagctgct
1981 caactccagc ctcttggaaa tgctcattgt gtggagtcct cagatcaaac caatgtactt
2041 tcttccacat ttctcagccc ccagtgttcc cctcagcatt caccgctggg ggctgtgaaa
2101 agcccacagc acatcagttt gcccccatca cccaacaacc ctcactttct gccctcatcc
2161 tccggggccc agggagaagg gcacagggtc tcctcgccca tcagcagcca ggtgtgcact
2221 gcacagaact caggagcaca cgatggccat cctccaagct tctctcccca ttcttccagc
2281 ctccacccgc ccttctctgg agcccaagca gacagcagtc atggtgccgg gggaaaccct
2341 tgtcccaaaa gcccatgtgt acagcaaaag atggctggtt tacactcttc tgataaggtg
2401 gggccaaagt tttcaattcc atccccaact ttttctaagt caagttcagc aatttcagag
2461 gtaacacagc ctccatccta tgaagatgcc gtaaagcagc aaatgacccg gagtcagcag
2521 atggatgaac tcctggacgt gcttattgaa agcggagaaa tgccagcaga cgctagagag
2581 gatcactcat gtcttcaaaa agtcccaaag atacccagat cttcccgaag tccaactgct
2641 gtcctcacca agccctcggc ttcctttgaa caagcctctt caggcagcca gatccccttt
2701 gatccctatg ccaccgacag tgatgagcat cttgaagtct tattaaattc ccagagcccc
2761 ctaggaaaga tgagtgatgt cacccttcta aaaattggga gcgaagagcc tcactttgat
2821 gggataatgg atggattctc tgggaaggct gcagaagacc tcttcaatgc acatgagatc
2881 ttgccaggcc ccctctctcc aatgcagaca cagttttcac cctcttctgt ggacagcaat
2941 gggctgcagt taagcttcac tgaatctccc tgggaaacca tggagtggct ggacctcact
3001 ccgccaaatt ccacaccagg ctttagcgcc ctcaccacca gcagccccag catcttcaac
3061 atcgatttcc tggatgtcac tgatctcaat ttgaattctt ccatggacct tcacttgcag
3121 cagtggtaga atgcccaatg caccagtgct atggaagacc aatggagttc catgggggaa
3181 agcacacagc catacatact ttactgtcca aaaacagaag aagaagaaga gaattaaaaa
3241 gaagcaatga tttctgtgcc aatgaacaag aacaaaagtc atttttagaa atacatatac
3301 tgtaatattt accaacagtc agtaactgtt aatgatttca acaatgcatt aaaagaatgt
3361 gctttctcag attaaggatg ccaaaaaaga tatttcactg ccttttcaaa gaccagtata
3421 ttttctagcc cataattttt ctc
//