LOCUS AK292884 3523 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75831 complete cds, highly similar to Homo
sapiens exportin, tRNA (nuclear export receptor for tRNAs) (XPOT),
mRNA.
ACCESSION AK292884
VERSION AK292884.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3523)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3523
/clone="TRACH3014836"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425681"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 320..3208
/codon_start=1
/note="highly similar to Homo sapiens exportin, tRNA
(nuclear export receptor for tRNAs) (XPOT), mRNA"
/protein_id="BAF85573.1"
/transl_table=1
/translation="MDEQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQ
RTYSDDHVKFFCFQVLEHQVKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIR
NKAAQVFALLFVTEYLTKWPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVH
TSEEARRNTLIKDTMREQCIPNLVESWYQILQNYQFTNSEVTCQCLEVVGAYVSWIDL
SLIANDRFINMLLGHMSIEVLREEACDCLFEVVNKGMDPVDKMKLVESLCQVLQSAGF
FSIDQEEDVDFLARFSKLVNGMGQSLIVSWSKLIKNGDIKNAQEALQAIETKVALMLQ
LLIHEDDDISSNIIGFCYDYLHILKQLTVLSDQQKANVEAIMLAVMKKLTYDEEYNFE
NEGEDEAMFVEYRKQLKLLLDRLAQVSPELLLASVRRVFSSTLQNWQTTRFMEVEVAI
RLLYMLAEALPVSHGAHFSGDVSKASALQDMMRTLVTSGVSSYQHTSVTLEFFETVVR
YEKFFTVEPQHIPCVLMAFLDHRGLRHSSAKVRSRTAYLFSRFVKSLNKQMNPFIEDI
LNRTQDLLELSPPENGHQSLLSSDDQLFIYETAGVLIVNSEYPAERKQALMRNLLTPL
MEKFKILLEKLMLAQDEERQASLADCLNHAVGFASRTSKAFSNKQTVKQCGCSEVYLD
CLQTFLPALSCPLQKDILRSGVRTFLHRVIICLEEEVLPFIPSASEHMLKDCEAKDLQ
EFIPLINQITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPAEENDQSAALEKQMLRRSY
FAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPIAQKTCFIILSKLVELW
GGKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLALSECAVTLKTIHLKRGPE
CVQYLQQEYLPSLQVAPEIIQEFCQALQQPDAKVFKNYLKVFFQRAKP"
BASE COUNT 1015 a 684 c 806 g 1018 t
ORIGIN
1 gcttgcttgc ctgcctgcct gcctgcccgg cgccacgcaa gagaaggtgc caggggacgc
61 agagcgacta gaggcgcgcg gtcccggcca gcaccgtctc tggcgttgta gctgcggccg
121 tggcggagga ctacggcgac aaggacgagg gccgctctcc cagctctctg cgtgccgcgc
181 cgctccgctc cgctggctga ccatctggag tgcaggctgg gaggcgggat ggagtgatag
241 ggaagatgtt tataaattct tctgtgggat cagagggcac gcctattaca accagaaaac
301 tacaagtata acagcgagga tggatgaaca ggctctatta gggctaaatc caaatgctga
361 ttcagacttt agacaaaggg ccctggccta ttttgagcag ttaaaaattt ccccagatgc
421 ctggcaggtg tgtgcagaag ctctagccca gaggacatac agtgatgatc atgtgaagtt
481 tttctgcttt caagtactgg aacatcaagt taaatacaaa tactcagaac taaccactgt
541 tcaacaacag ctaattaggg agacgctcat atcatggctg caagctcaga tgctgaatcc
601 ccaaccagag aagaccttta tacgaaataa agccgcccaa gtcttcgcct tgctttttgt
661 tacagagtat ctcactaagt ggcccaagtt tttttttgac attctctcag tagtggacct
721 aaatccaagg ggagtagatc tctacctgcg aatcctcatg gctattgatt cagagttggt
781 ggatcgtgat gtggtgcata catcagagga ggctcgtagg aatactctca taaaagatac
841 catgagggaa cagtgcattc caaatctggt ggaatcatgg taccaaatat tacaaaatta
901 tcagtttact aattctgaag tgacgtgtca gtgccttgaa gtagttgggg cttatgtctc
961 ttggatagac ttatccctta tagccaatga taggtttata aatatgctgc taggtcatat
1021 gtcaatagaa gttctacggg aagaagcatg tgactgttta tttgaagttg taaataaagg
1081 aatggaccct gttgataaaa tgaaactagt ggaatctttg tgtcaagtat tacagtctgc
1141 tgggtttttc agcattgacc aggaagaaga tgttgacttc ctggccagat tttctaagtt
1201 ggtaaatgga atgggacagt cattgatagt tagttggagt aaattaatta agaatgggga
1261 tattaagaat gctcaagagg cactacaagc tattgaaaca aaagtggcac tgatgttgca
1321 gctactaatt catgaggatg atgatatttc ttctaatatt attggatttt gttacgatta
1381 tcttcatatt ttgaaacagc ttacagtgct ctcggatcag caaaaagcta atgtagaggc
1441 aatcatgttg gccgttatga aaaaattgac ttacgatgaa gaatataact ttgaaaatga
1501 gggtgaagat gaagccatgt ttgtagaata tagaaaacaa ctgaagttac tgttggacag
1561 gcttgctcaa gtttcaccag agttactact ggcctctgtt cgcagagttt ttagttctac
1621 actgcagaat tggcagacta cacggtttat ggaagttgaa gtagcaataa gattgctgta
1681 tatgttggca gaagctcttc cagtatctca tggtgctcac ttctcaggtg atgtttcaaa
1741 agctagtgct ttgcaggata tgatgcgaac tctggtaaca tcaggagtca gttcctatca
1801 gcatacatct gtgacattgg agttcttcga aactgttgtt agatatgaaa agtttttcac
1861 agttgaacct cagcacattc catgtgtact aatggctttc ttagatcaca gaggtctgcg
1921 gcattccagt gcaaaagttc ggagcaggac ggcttacctg ttttctagat ttgtcaaatc
1981 tctcaataag caaatgaatc ctttcattga ggatattttg aatagaacac aagatttatt
2041 agagctttct ccacctgaga atggccacca gtccttactg agcagcgatg atcaactttt
2101 tatttatgag acagctggag tgctgattgt taatagtgaa tatccggcag aaaggaaaca
2161 agccttaatg aggaatctgt tgactccact aatggagaag tttaaaattc tgttagaaaa
2221 gttgatgctg gcacaagatg aagaaaggca agcctctcta gcagactgtc ttaaccatgc
2281 tgttggattt gcaagtcgaa ccagtaaagc tttcagcaac aaacagactg tgaaacaatg
2341 tggctgttcc gaagtttatc tggactgttt acagacattc ttgccagccc tcagttgtcc
2401 cttacaaaag gatattctca gaagtggagt ccgtactttc cttcatcgag tgattatttg
2461 cctggaggaa gaagttcttc cgttcattcc atctgcttca gaacatatgc tcaaagattg
2521 tgaagcaaaa gatctccagg agttcattcc tcttatcaac cagattacgg ccaaattcaa
2581 gatacaggta tccccgtttt tacaacagat gttcatgccc ctgcttcatg caatttttga
2641 agtgctgctc cggccagcag aagaaaatga ccagtctgct gctttagaga agcagatgtt
2701 gcggaggagt tactttgctt tcctgcaaac agtcacaggc agtgggatga gcgaagttat
2761 agcaaatcaa ggtgcagaga atgtagaaag agtgttggtt actgttatcc aaggagcagt
2821 tgaatatcca gatccaattg cacagaaaac atgttttatc atcctctcaa agttggtaga
2881 actctgggga ggtaaagatg gaccagtggg atttgctgat tttgtttata agcacattgt
2941 ccccgcatgt ttcctagcac ctttaaaaca aacctttgac ctggcagatg cacaaacagt
3001 attggcttta tctgagtgtg cagtgacact gaaaacaatt catctcaaac ggggcccaga
3061 atgtgttcag tatcttcaac aagaatacct gccctccttg caagtagctc cagaaataat
3121 tcaggagttt tgtcaagcgc ttcagcagcc tgatgctaaa gtttttaaaa attacttaaa
3181 ggtgttcttc cagagagcaa agccctgagg actggatttc cctgtgccta cttcatgatc
3241 atgaattcca gttaatttat aaagaggcga tttttgtgtg ccattcacac tggtcttttt
3301 cacattgttt tgagcttatt gcagtatatg ttttgggatt tttctgtaaa atgggtgtaa
3361 ttttcctaat acaggtatgt aacaacaaaa gaagttgcct gcatgccggt ccaaattgtt
3421 ctgtataaag atgctcttaa aagacacaag agttatccta gaaccttaat tcttttttat
3481 ttgaaatttt aagtcaagtc ctttataaag accatagcag tgg
//