LOCUS AK292878 1926 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77701 complete cds, highly similar to Homo
sapiens B-cell CLL/lymphoma 6, member B (zinc finger
protein)(BCL6B), mRNA.
ACCESSION AK292878
VERSION AK292878.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1926)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1926
/clone="TRACH3014493"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425675"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 46..1488
/codon_start=1
/note="highly similar to Homo sapiens B-cell CLL/lymphoma
6, member B (zinc finger protein)(BCL6B), mRNA"
/protein_id="BAF85567.1"
/transl_table=1
/translation="MGSPAAPEGALGYVREFTRHSSDVLGNLNELRLRGILTDVTLLV
GGQPLRAHKAVLIACSGFFYSIFRGRAGVGVDVLSLPGGPEARGFAPLLDFMYTSRLR
LSPATAPAVLAAATYLQMEHVVQACHRFIQASYEPLGISLRPLEAEPPTPPTAPPPGS
PRRSEGHPDPPTESRSCSQGPPSPASPDPKACNWKKYKYIVLNSQASQAGSLVGERSS
GQPCPQARLPSGDEASSSSSSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPY
LLTSQAQDTSGSPSERARPLPGSEFFSCQNCEAVAGCSSGLDSLVPGDEDKPYKCQLC
RSSFRYKGNLASHRTVHTGEKPYHCSICGARFNRPANLKTHSRIHSGEKPYKCETCGS
RFVQVAHLRAHVLIHTGEKPYPCPTCGTRFRHLQTLKSHVRIHTGEKPYHCDPCGLHF
RHKSQLRLHLRQKHGAATNTKVHYHILGGP"
BASE COUNT 403 a 634 c 519 g 370 t
ORIGIN
1 aagaagagaa gccgcggccc ctgcaggacg ggggcctgtg tcgctatggg ttcccccgcc
61 gccccggagg gagcgctggg ctacgtccgc gagttcactc gccactcctc cgacgtgctg
121 ggcaacctca acgagctgcg cctgcgcggg atcctcactg acgtcacgct gctggttggc
181 gggcaacccc tcagagcaca caaggcagtt ctcatcgcct gcagtggctt cttctattca
241 attttccggg gccgtgcggg agtcggggtg gacgtgctct ctctgcccgg gggtcccgaa
301 gcgagaggct tcgcccctct attggacttc atgtacactt cgcgcctgcg cctctctcca
361 gccactgcac cagcagtcct agcggccgcc acctatttgc agatggagca cgtggtccag
421 gcatgccacc gcttcatcca ggccagctat gaacctctgg gcatctccct gcgccccctg
481 gaagcagaac ccccaacacc cccaacggcc cctccaccag gtagtcccag gcgctccgaa
541 ggacacccag acccacctac tgaatctcga agctgcagtc aaggcccccc cagtccagcc
601 agccctgacc ccaaggcctg caactggaaa aagtacaagt acatcgtgct aaactctcag
661 gcctcccaag cagggagcct ggtcggggag agaagttctg gtcaaccttg cccccaagcc
721 aggctcccca gtggagacga ggcctccagc agcagcagca gcagcagcag cagcagcagt
781 gaagaaggac ccattcctgg tccccagagc aggctctctc caactgctgc cactgtgcag
841 ttcaaatgtg gggctccagc cagtaccccc tacctcctca catcccaggc tcaagacacc
901 tctggatcac cctctgaacg ggctcgtcca ctaccgggaa gtgaattttt cagctgccag
961 aactgtgagg ctgtggcagg gtgctcatcg gggctggact ccttggttcc tggggacgaa
1021 gacaaaccct ataagtgtca gctgtgccgg tcttcgttcc gctacaaggg caaccttgcc
1081 agtcaccgta cagtgcacac aggggaaaag ccttaccact gctcaatctg cggagcccgt
1141 tttaaccggc cagcaaacct gaaaacgcac agccgcatcc attcgggaga gaagccgtat
1201 aagtgtgaga cgtgcggctc gcgctttgta caggtggcac atctgcgggc gcacgtgctg
1261 atccacaccg gggagaagcc ctacccttgc cctacctgcg gaacccgctt ccgccacctg
1321 cagaccctca agagccacgt tcgcatccac accggagaga agccttacca ctgcgacccc
1381 tgtggcctgc atttccggca caagagtcaa ctgcggctgc atctgcgcca gaaacacgga
1441 gctgctacca acaccaaagt gcactaccac attctcgggg ggccctagct gagcgcaggc
1501 ccaggcccca cttgcttcct gcgggtggga aagctgcagg cccaggcctt gcttccctat
1561 caggcttggg cataggggtg tgccaggcca ctttggtatc agaaattgcc accctcttaa
1621 tttctcactg gggagagcag gggtggcaga tcctggctag atctgcctct gttttgctgg
1681 tcaaaacctc ttccccacaa gccagattgt ttctgaggag agagctagct aggggctggg
1741 aaaggggaga gattggagtc ctggtctccc taagggaata gccctccacc tgtggccccc
1801 attgcattca gtttatctgt aaatataatt tattgaggcc tttgggtggc accggggcct
1861 tcattcgatt gcatttccca ctcccctctt ccacaagtgt gattaaaagt gaccagaaac
1921 acagaa
//