LOCUS AK292871 1380 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76972 complete cds, highly similar to Homo
sapiens RIB43A domain with coiled-coils 1, transcript variant 1,
mRNA.
ACCESSION AK292871
VERSION AK292871.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1380)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1380
/clone="TRACH3012808"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425668"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 194..1333
/codon_start=1
/note="highly similar to Homo sapiens RIB43A domain with
coiled-coils 1, transcript variant 1, mRNA"
/protein_id="BAF85560.1"
/transl_table=1
/translation="MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQA
LNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQK
QQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQF
RYNLERQQQEQQQAKVDENYTDALSNQLRLAMDAQATHLARLEESCRAAMMCAMANAN
KAQAAVQAGRQRCERQREQKANLAEIQHQSTSDLLTENPQVTQHPMAPYRVLPYCWKG
MTPEQQAAIRKEQEVQRSKKQAHRQAEKTLDTEWKSQTMSSAQAVLELEEQERELCAV
FQRGLGSFNQQLANEQKAQQDYLNSVIYTNQPTAQYHQQFNTSSR"
BASE COUNT 414 a 346 c 384 g 236 t
ORIGIN
1 gagtcagagc agttcttgag gttcaaggag gcgggggaga cctgagctca cgcttgctga
61 gacagaagtc acagcaggat tatgcccctc agggcaagag gaagagttca gaaactgccg
121 ccgtaaccca agaacaaagt tgcatgcaga gccaacctaa gagcttcaaa atcgggattc
181 cttactgaga aagatgtata acataaaaca gtcaacagat accaaggaag cagcagccat
241 cgaggctaga agaaatcgag aaaaagagcg acaaaaccga ttcttcaatg tgcggaaccg
301 agtcatgggg gtggatgtcc aggccctgaa caaccaggtg ggagaccgaa agcgtcggga
361 agcagcagaa agaagcaagg aggcagctta tggtaccagc caggtgcagt atgatgtggt
421 agtccagatg ttagagaagg aagaggcaga tcgaacacgt cagctggcca aaaaagtcca
481 ggagtttcgg gagcagaagc agcagctcaa gaacgggcgt gaatttagtc tttgggatcc
541 aggccaagtc tggaaggggc ttccaaccta tcttagttac agtaatacct atcctggtcc
601 agccagcctg cagtacttct ctggggaaga cctagacagg gacacacggc tgagaatgca
661 gcaggggcag ttcaggtaca acttggaaag gcaacagcag gagcaacagc aagccaaggt
721 tgatgagaat tatacagatg cgctcagtaa ccagctgcgc ctcgccatgg atgcacaggc
781 cacccatctg gccaggctgg aggagtcctg tcgtgcggcc atgatgtgtg ccatggccaa
841 cgccaacaaa gcgcaggcag ctgtgcaggc tgggcgtcag cgctgtgagc gtcagcgtga
901 acagaaggcc aaccttgcgg agatccagca ccagagcacg agtgacctac tgactgaaaa
961 cccccaggtc acccaacacc ctatggctcc ctaccgggtc ctgccctatt gctggaaggg
1021 catgactcca gagcagcaag ctgccatcag gaaagagcag gaagtacaac gctctaagaa
1081 gcaagcacac cgtcaggctg agaaaacact ggatactgaa tggaaaagcc agactatgag
1141 ctcagcccag gcagtgctgg agctagaaga gcaggagagg gaattgtgtg ctgtatttca
1201 aaggggtcta ggatccttca accagcagct ggctaatgag caaaaagccc agcaggatta
1261 cctgaattca gtaatctaca ccaatcaacc tacagcccag tatcaccagc agtttaacac
1321 cagcagccgc taagttcagg atgtctatct ctctctccct tctcctccat caagctcaca
//