LOCUS AK292859 2016 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77242 complete cds, highly similar to Homo
sapiens staufen, RNA binding protein (STAU), transcript variant
T4, mRNA.
ACCESSION AK292859
VERSION AK292859.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2016)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2016
/clone="TRACH3011052"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425656"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 154..1644
/codon_start=1
/note="highly similar to Homo sapiens staufen, RNA
binding protein (STAU), transcript variant T4, mRNA"
/protein_id="BAF85548.1"
/transl_table=1
/translation="MKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPL
LYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLPERLEVNGRESEEENLNK
SEISQVFEIALKRNLPVNFEVARESGPPHMKNFVTKVSVGEFVGEGEGKSKKISKKNA
AIAVLEELKKLPPLPAVERVKPRIKKKTKPIVKPQTSPEYGQGINPISRLAQIQQAKK
EKEPEYTLLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLEILGFKVP
QAQPTKPALKSEEKTPIKKPGDGRKVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPA
GILPMVPEVAQAVGVSQGHHTKDFTRAAPNPAKATVTAMIARELLYGGTSPTAETILK
NNISSGHVPHGPLTRPSEQLDYLSRVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLIS
HGIGKDVESCHDMAALNILKLLSELDQQSTEMPRTGNGPMSVCGRC"
BASE COUNT 593 a 488 c 524 g 411 t
ORIGIN
1 aggaccgccg gccgggggac gagctcggag cagcagccag agtttattaa ccacttaacc
61 tctcagaact gaacaaagac aacattgttc ctggaacgcc ctctttttaa aaaagaaagc
121 ataaccccta ctgtagaact aaatgcactg tgcatgaaac ttggaaaaaa accaatgtat
181 aagcctgttg acccttactc tcggatgcag tccacctata actacaacat gagaggaggt
241 gcttatcccc cgaggtactt ttacccattt ccagttccac ctttacttta tcaagtggaa
301 ctttctgtgg gaggacagca atttaatggc aaaggaaaga caagacaggc tgcgaaacac
361 gatgctgctg ccaaagcgtt gaggatcctg cagaatgagc ccctgccaga gaggctggag
421 gtgaatggaa gagaatccga agaagaaaat ctcaataaat ctgaaataag tcaagtgttt
481 gagattgcac ttaaacggaa cttgcctgtg aatttcgagg tggcccggga gagtggccca
541 ccccacatga agaactttgt gaccaaggtt tcggttgggg agtttgtggg ggaaggtgaa
601 gggaaaagca agaagatttc aaagaaaaat gccgccatag ctgttcttga ggagctgaag
661 aagttaccgc ccctgcctgc agttgaacga gtaaagccta gaatcaaaaa gaaaacaaaa
721 cccatagtca agccacagac aagcccagaa tatggccagg ggatcaatcc gattagccga
781 ctggcccaga tccagcaggc aaaaaaggag aaggagccag agtacacgct cctcacagag
841 cgaggcctcc cgcgccgcag ggagtttgtg atgcaggtga aggttggaaa ccacactgca
901 gaaggaacgg gcaccaacaa gaaggtggcc aagcgcaatg cagccgagaa catgctggag
961 atccttggtt tcaaagtccc gcaggcgcag cccaccaaac ccgcactcaa gtcagaggag
1021 aagacaccca taaagaaacc aggggatgga agaaaagtaa ccttttttga acctggctct
1081 ggggatgaaa atgggactag taataaagag gatgagttca ggatgcctta tctaagtcat
1141 cagcagctgc ctgctggaat tcttcccatg gtgcccgagg tcgcccaggc tgtaggagtt
1201 agtcaaggac atcacaccaa agattttacc agggcagctc cgaatcctgc caaggccacg
1261 gtaactgcca tgatagcccg agagttgttg tatgggggca cctcgcccac agccgagacc
1321 attttaaaga ataacatctc ttcaggccac gtaccccatg gacctctcac gagaccctct
1381 gagcaactgg actatctttc cagagtccag ggattccagg ttgaatacaa agacttcccc
1441 aaaaacaaca agaacgaatt tgtatctctt atcaattgct cctctcagcc acctctgatc
1501 agccatggta tcggcaagga tgtggagtcc tgccatgata tggctgcgct gaacatctta
1561 aagttgctgt ctgagttgga ccaacaaagt acagagatgc caagaacagg aaacggacca
1621 atgtctgtgt gtgggaggtg ctgaaccttt tctggccatg aaccattata aaatcccaac
1681 atatatactg aaaatactga aactgctttg aaaatttgga atttctgata cctccagtgg
1741 gccgagagac acggtgggta aaggatgtgg gcagcagcag ggaagacaac agaaacacaa
1801 ggaggcggct gtggccgggc tggactgtgc tggggtttgt tgtgatggcc actcggtgac
1861 ctggcggtcc ctacgcaata gcagctgcct gtggggaaga agggctgccc agccagctgg
1921 ttctcccggg acaccagcag atccacaccc tgggcacctc cgtgtttggt cttttttttc
1981 ccctgtgtga aagaagaaac ggcacgaccc cttctc
//