LOCUS AK292829 1872 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77280 complete cds, highly similar to Homo
sapiens UBX domain containing 2 (UBXD2), mRNA.
ACCESSION AK292829
VERSION AK292829.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1872)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1872
/clone="TRACH3004815"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425626"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 5..1531
/codon_start=1
/note="highly similar to Homo sapiens UBX domain
containing 2 (UBXD2), mRNA"
/protein_id="BAF85518.1"
/transl_table=1
/translation="MLWFQGAIPAAIATAKRSGAVFVVFVAGDDEQSTQMAASWEDDK
VTEASSNSFVAIKIDTKSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADEL
VTRIHKVRQMHLLKSETSVANGSQSESSVSTPSASFEPNNTCENSQSRNAELCEIPPT
SDTKSDTATGGESAGHATSSQEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEE
QREIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDR
AERAARFAKTKEEVEAAKAAALLAKQAEMEVKRESYARERSTVARIQFRLPDGSSFTN
QFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVV
LLPAGRPTASIVHSSSGDIWTLLGTVLYPFLAIWRLISNFLFSNPPPTQTSVRVTSSE
PPNPASSSKSEKREPVRKRVLEKRGDDFKKEGKIYRLRTQDDGEDENNTWNGNSTQQM
"
BASE COUNT 619 a 364 c 431 g 458 t
ORIGIN
1 agcgatgctg tggttccagg gcgccattcc ggccgccatc gcgacggcca aaaggagcgg
61 cgcggtcttc gtggtgttcg tggcaggtga tgatgaacag tctacacaga tggctgcaag
121 ttgggaagat gataaagtta cagaagcatc ttcaaacagt tttgttgcta ttaaaatcga
181 taccaaaagt gaagcctgcc tacagttttc acaaatctat cctgtagtgt gtgttccatc
241 cagtttcttt attggagaca gtggaattcc cttggaagta atagcaggaa gtgtttctgc
301 agatgaactt gttacaagaa ttcacaaggt ccgacagatg catttgctaa aaagtgaaac
361 atcagtagca aatggcagtc agtcagaaag ttcagtgtct actccatctg cgtcatttga
421 acctaacaac acttgtgaaa actctcagtc cagaaatgca gagctttgtg agataccacc
481 cacttctgat acaaagtcag atactgcaac aggaggagaa agtgcaggcc atgccacttc
541 ctctcaggag cctagtggat gctcagatca gagacctgca gaggacctca acatccgagt
601 ggaaagacta acaaaaaaac ttgaagaaag gagagaagag aaaagaaaag aggaagaaca
661 gagagaaatt aagaaggaaa ttgagaggag aaaaactgga aaagaaatgt tggattataa
721 aagaaaacaa gaagaagaat taacaaaaag aatgctggag gaaagaaaca gagagaaagc
781 agaagatagg gcagctcgag aacgtataaa acagcagatt gcattggacc gtgcagagag
841 agctgctcgt tttgcaaaga caaaggaaga agtagaggct gccaaagctg ctgccttgct
901 agcaaaacag gcagaaatgg aagtcaagag ggaatcttat gcaagagaaa gaagcactgt
961 tgcaagaatt caattccgtc ttcctgatgg ttcttccttt acaaatcagt tcccttctga
1021 tgctcctcta gaagaggcaa ggcagtttgc tgcacagact gttggcaaca cttacggtaa
1081 tttttcgtta gcaaccatgt ttcccaggag ggaatttacc aaagaagatt ataaaaagaa
1141 gttactggat ttggaacttg ccccaagcgc ttcggtggta ctgttgccag caggaagacc
1201 aactgcatcc attgtacact cttccagcgg agacatttgg accttgttgg gaacagtgct
1261 ttatccattc cttgccatct ggagattaat tagcaatttc ttgtttagta atccgcctcc
1321 cacacagact tcagtgagag taacatcgtc agaaccccca aaccctgcat catctagcaa
1381 atcagaaaaa agggaaccag tgagaaaaag agtgctggaa aaacgtggag acgactttaa
1441 aaaggagggg aaaatttata gattaaggac tcaagatgat ggtgaagatg aaaacaacac
1501 ttggaatgga aattccactc aacagatgta gtgtgacaag tataatatgt gcaataatca
1561 ttgtttctct tatgatttaa ttcaactaaa attctactgg agaagtggga ctgctttata
1621 ttttccaact ggtctataaa atgtctcttt attcctgctt agtgggtgtg ggttgaaggt
1681 gtttaactca gaaaagtaaa gacaggaaat aactctctgc taggtccttg cttatatggc
1741 aaccactgct agaaccctaa aagaaccaaa aatctgccac agcctgcctc catcagcttc
1801 ttatttagta tttcatatgc ccattagccc tatgcttcag atgacacgtt ttgtttagag
1861 ctactttgct cc
//