LOCUS AK292826 3391 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76128 complete cds, highly similar to Homo
sapiens TBC1 domain family, member 8 (with GRAM domain) (TBC1D8),
mRNA.
ACCESSION AK292826
VERSION AK292826.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3391)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3391
/clone="TRACH3004744"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000425623"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 494..3187
/codon_start=1
/note="highly similar to Homo sapiens TBC1 domain family,
member 8 (with GRAM domain) (TBC1D8), mRNA"
/protein_id="BAF85515.1"
/transl_table=1
/translation="MEQLADVTLRRLLDNEVFDLDPDLQEPSQITKRDLEARAQNEFF
RAFFRLPRKEKLHAVVDCSLWTPFSRCHTAGRMFASDSYICFASREDGCCKIILPLRE
VVSIEKMEDTSLLPHPIIVSIRSKVAFQFIELRDRDSLVEALLARLKQVHANHPVHYD
TSADDDMASLVFHSTSMCSDHRFGDLEMMSSQNSEESEKEKSPLMHPDALVTAFQQSG
SQSPDSRMSREQIKISLWNDHFVEYGRTVCMFRTEKIRKLVAMGIPESLRGRLWLLFS
DAVTDLASHPGYYGNLVEESLGKCCLVTEEIERDLHRSLPEHPAFQNETGIAALRRVL
TAYAHRNPKIGYCQSMNILTSVLLLYTKEEEAFWLLVAVCERMLPDYFNHRVIGAQVD
QSVFEELIKGHLPELAEHMNDLSALASVSLSWFLTLFLSIMPLESAVNVVDCFFYDGI
KAIFQLGLAVLEANAEDLCSSKDDGQALMILSRFLDHIKNEDSPGPPVGSHHAFFSDD
QEPYPVTDISDLIRDSYEKFGDQSVEQIEHLRYKHRIRVLQGHEDTTKQNVLRVVIPE
VSILPEDLEELYDLFKREHMMSCYWEQPRPMASRHDPSRPYAEQYRIDARQFAHLFQL
VSPWTCGAHTEILAERTFRLLDDNMDQLIEFKAFVSCLDIMYNGEMNEKIKLLYRLHI
PPALTENDRDSQSPLRNPLLSTSRPLVFGKPNGDAVDYQKQLKQMIKDLAKEKDKTEK
ELPKMSQREFIQFCKTLYSMFHEDPEENDLYQAIATVTTLLLQIGEVGQRGSSSGSCS
QECGEELRASAPSPEDSVFADTGKTPQDSQAFPEAAEGDWTVSLEHILASLLTEQSLV
NFFEKPLDMKSKLENAKTNQYNLKTFEMSHQSQSELKLSNL"
BASE COUNT 864 a 887 c 898 g 742 t
ORIGIN
1 tggtgcaaca ttagaggaaa tcaatcagca ctgggactgg ctggaacaaa atctcctcca
61 caccttgtct gtctttgata ataaagatga cattgccagt tttgtcaaag ggaaggtaaa
121 ggctctgata gccgaggaga ccagcagcag gctcgccgag caggaggagg aacccgagaa
181 attccgagaa gccctggtga agttcgaggc caggttcaac ttccccgagg cggagaagct
241 ggtcacctac tactcctgct gctgttggaa gggcagggtg ccccgccagg gctggctgta
301 cctcagcatc aaccacctct gcttctactc cttcttcctg ggcaaggaac ttaaacttgt
361 ggttccgtgg gttgatatcc agaaattaga aagaacgtcc aatgtctttc tgacggatac
421 catccgaatc accacgcaga ataaggagcg tgacttctcc atgttcctga acctggatga
481 ggtgtttaag gtcatggagc agctggccga cgtgacgctg cgaaggctgc tggataatga
541 ggtctttgac ctcgaccccg atctgcagga gccgagccag atcaccaaga gggacctgga
601 agccagagca cagaatgagt tcttccgggc tttcttcagg ttgccgagga aggagaagct
661 gcacgcggtt gtggactgtt cgctctggac gccgttcagt cgctgtcaca ccgcggggcg
721 gatgttcgcc tctgacagct acatctgctt tgccagcaga gaagatggct gctgtaagat
781 catcctgcca ctcagagagg tggtgagcat cgagaagatg gaggacacga gcctgctgcc
841 gcatcccatc attgtcagta tcagaagcaa ggtggccttc cagttcattg agctccggga
901 ccgagacagc ctggtggagg cgctgcttgc gaggttgaag caggtccacg ccaaccaccc
961 cgtgcactac gacacctctg cggatgatga catggcttca ctcgtgtttc attcaacaag
1021 catgtgcagt gaccacagat ttggggatct tgaaatgatg tcttctcaaa atagcgagga
1081 gagtgagaaa gagaagagcc cgctgatgca ccccgatgcc ctggtcaccg ccttccagca
1141 gtcaggcagc cagagccctg actcccgaat gtccagagaa cagataaaaa taagcctgtg
1201 gaatgaccac tttgtggaat acggcagaac cgtgtgtatg tttcgcacag agaagattcg
1261 gaagctcgta gccatgggca tccctgaatc tttgcgaggg agactctggc ttctcttctc
1321 agatgcggtg acggatcttg cctcacaccc tggttactac gggaatctgg tggaggagtc
1381 cctggggaaa tgctgcctgg taaccgagga gatagaacga gacctgcacc gctccctgcc
1441 agagcacccc gccttccaga acgaaacggg aattgctgct ttgaggagag tcttgacggc
1501 ctatgcccac cggaacccca agattggata ctgccagtcc atgaacatcc tgacctccgt
1561 gctgctgctg tacaccaagg aggaggaagc cttctggctg ttggttgctg tgtgtgagcg
1621 gatgctgccc gattacttca accaccgagt gatcggggca caagttgacc agtctgtctt
1681 cgaggagctc atcaagggtc atctcccaga gctggcagag cacatgaacg acctctcagc
1741 cctggcgtcc gtctctctct cgtggttcct gaccctgttc ctcagcatca tgcctctaga
1801 gagtgcggtg aatgtggtag actgcttctt ctatgatggc atcaaagcca tcttccagct
1861 gggactggct gtgcttgagg ccaatgctga ggacctgtgc agcagcaagg atgatggcca
1921 ggccttgatg atcctcagca ggtttctaga tcacattaag aatgaggaca gcccagggcc
1981 cccagttggc agccaccatg cctttttctc cgacgaccag gagccctacc ctgtgactga
2041 tatttcggac ctgatccggg attcctatga gaaatttgga gaccagtctg tggagcagat
2101 cgagcaccta cgttacaagc acaggatcag ggtcctccaa ggccacgagg acaccacaaa
2161 gcagaacgtg cttcgagtcg ttatcccgga agtctcaatt cttcctgaag acctagagga
2221 gctctacgac ttattcaaga gagaacatat gatgagctgt tactgggagc agcccaggcc
2281 catggcctca cgccacgacc ccagccggcc ctatgctgag cagtaccgca tagacgcccg
2341 gcagtttgca cacctgtttc agctagtctc gccctggacc tgcggggccc acacggagat
2401 cctcgccgaa aggacgttca ggctcttgga tgacaacatg gaccagctca tcgagttcaa
2461 agcgtttgtg agctgcctcg atattatgta taatggagaa atgaatgaga agattaaact
2521 attatacagg cttcatatcc ctccagcact cactgaaaat gaccgagaca gccagtcgcc
2581 gttgaggaat cctctgttgt caacatcgag acccctggtt ttcgggaaac ccaatggtga
2641 tgcagttgat tatcagaaac agctgaagca gatgattaag gatttagcca aagaaaaaga
2701 taaaactgag aaagaattgc ccaaaatgag ccagagagaa tttatccagt tctgtaaaac
2761 tctgtacagt atgttccatg aagatccaga agaaaatgat ttgtatcaag ccatcgccac
2821 agtcaccaca ctgctgctgc agatcgggga ggtggggcag cgaggcagca gctctggaag
2881 ctgctcccag gagtgtgggg aggagctgcg ggcttcagct ccttctcctg aggactcggt
2941 ttttgcagac actgggaaga cgccccagga ctcccaggca tttccagagg cggcagaagg
3001 ggactggact gtctcccttg aacatatttt agcttcactt ctgactgaac agtcattagt
3061 caactttttt gaaaagccac tggacatgaa atccaaactt gaaaatgcca agaccaatca
3121 gtacaatctc aaaacttttg aaatgagcca ccaatcacaa tctgaactta agctgagtaa
3181 cttgtagcaa gacagcagct gctatgcaca ctggagtcca ccataccaaa gcacgaacca
3241 gactgtttct tggggtcagc cctaaaccga gatttcagtc taccttacca atggggcatc
3301 tggctaaaca acctgacaaa ctgtggccag gggaaccgac acaaccctca agcatttcta
3361 tgtattgaga attgtcagtg ccctaaggta t
//