LOCUS AK292765 1614 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78192 complete cds, highly similar to Homo
sapiens leucine rich repeat containing 46 (LRRC46), mRNA.
ACCESSION AK292765
VERSION AK292765.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1614)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1614
/clone="TOVAR2001853"
/clone_lib="TOVAR2"
/db_xref="H-InvDB:HIT000425562"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="ovary, tumor tissue"
CDS 279..1244
/codon_start=1
/note="highly similar to Homo sapiens leucine rich repeat
containing 46 (LRRC46), mRNA"
/protein_id="BAF85454.1"
/transl_table=1
/translation="MSGGKSAQGPEEGGVCITEALITKRNLTFPEDGELSEKMFHTLD
ELQTVRLDREGITTIRNLEGLQNLHSLYLQGNKIQQIENLACIPSLRFLSLAGNQIRQ
VENLLDLPCLQFLDLSENLIETLKLDEFPQSLLILNLSGNSCTNQDGYRELVTEALPL
LLDLDGQPVVERWISDEEDEASSDEEFPELSGPFCSERGFLKELEQELSRHREHRQQT
ALTEHLLRMEMQPTLTDLPLLPGVPMAGDSSPSATPAQGEETVPEAVSSPQASSPTKK
PCSLIPRGHQSSFWGRKGARAATAPKASVAEAPSTTKTTAKRSKK"
BASE COUNT 371 a 515 c 393 g 335 t
ORIGIN
1 aactgctcct ttctcaacca ttcctgccca caacacccca gcttgctgcc agcaaagccc
61 ctccacaccc ctcaaactcc agacccttca catcaattta ctgttttctt cgacctcacc
121 ccagcaattt tctctgaatc aacccccttt cctcctctcc taagtctctg agtttctctc
181 tcctcctgcc atcctgagtt ctgccatcct taggggccgc caagacctct cttttcgttc
241 ctctcccgcc tcagaccagc agccttttat tttagatcat gtctggaggg aagtcagccc
301 agggtccaga ggaagggggc gtctgcatca ctgaagccct tatcactaag cggaacttga
361 ctttccctga agatggggaa ctgtcagaga agatgtttca cactcttgat gaactgcaga
421 ctgtccgcct ggaccgggag gggattacta ctatcaggaa cttagaaggc ctccagaatc
481 ttcacagtct ctatctgcaa gggaataaga tccagcaaat tgagaacctg gcttgcatcc
541 cctccttgcg cttcctgtct ctggcaggaa accaaatcag gcaggtggaa aacctcctcg
601 acctcccatg cctccagttt ctggaccttt ctgagaacct gatagaaaca ttgaagctgg
661 atgagttccc ccagagcctt ctcatcctca acctgtctgg aaacagctgc accaaccagg
721 atggctaccg cgagctagtg acagaagccc tgccacttct cctggacctg gacgggcagc
781 ctgtggtgga gcgctggatt tcggatgagg aggatgaagc ctcaagcgat gaggagttcc
841 cagagctgag tggcccattc tgctcagaac gaggcttcct caaggagctg gagcaggagc
901 tgagcaggca cagggagcac cggcaacaga cggccctgac agagcacctg ctgaggatgg
961 agatgcagcc caccctcacc gacctgcccc tgctacctgg ggtgcccatg gctggggaca
1021 gcagcccttc tgccactcct gcgcaagggg aggagacagt ccctgaggcc gtctcctcac
1081 cccaggcctc ctctcccacc aagaaaccat gcagtctgat tcccaggggc caccaaagct
1141 ctttctgggg aaggaagggg gcacgagcag ccacagcccc caaggcctct gtggctgagg
1201 cccccagcac aaccaaaact acggccaaga gaagcaagaa atgattctct gtcaaccttt
1261 ctctactagt ggagaggagt ggggcctgcc cctcttctca gacctctgac ctgtgacaga
1321 agcccatccc cagtaaagtg tctctaggcc ctgagtatgc ttttcatgtc acttggggta
1381 tctcagggga agaaaccagt gaaagctcca ggaaacaaaa tacagagctc agtgagccac
1441 ctgattctaa agagcgagtc tggaatcttt cgggagctac ccacagggca ggcatgcctc
1501 aggcccccgc tggcttcctg gctcccactt gggcaggaag cgggcaccac ctcatggaag
1561 aggcatgcca tctcactgcc acccctagcg agtgcccttc cccggtccaa gcca
//