LOCUS AK292727 1988 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76729 complete cds, highly similar to Homo
sapiens vaccinia related kinase 2 isoform 6 (VRK2) mRNA.
ACCESSION AK292727
VERSION AK292727.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1988)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1988
/clone="TKIDN2004921"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000425524"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 614..1804
/codon_start=1
/note="highly similar to Homo sapiens vaccinia related
kinase 2 isoform 6 (VRK2) mRNA"
/protein_id="BAF85416.1"
/transl_table=1
/translation="MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIY
LAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL
FYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN
EYVHGDVKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS
LDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVL
KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINV
HTPNSQKVDSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEA
AQFR"
BASE COUNT 668 a 378 c 426 g 516 t
ORIGIN
1 ttcagttcac aacttccatc cagaatccta cttctctgat tgtcctcatg gggaaagtat
61 gctatttcct tcatcctaca agatgcttct cactgactct atccatattc ttctcatcct
121 tcaagagcca agtcaaatct ctctgcttcc aataagcctt ccttgctaca ctcagaaatg
181 gaatgaatcc ccaagatggc ttaaggatgc ccttctgttt tggaatgctt tctcttggtg
241 tatatcaagg ttggttcagt ttaccagaga aaagatgcca gtgtcataaa gaagaatatt
301 tgaagctcta taaatatgtt gctttacgtg gcaaaaagga ctttacagat ctgagtacac
361 tggattatct gggtgggcac aatgtaatca caaggggctt tctaagaagg aagaaggagg
421 gttcaaggca gaaaaaccgg aagaagttat aacattggct ttgaagatgg aagatgggga
481 cacaagtcaa ggaattcagg tggcctctag aagcctgaaa agtcaaagaa atgaattctc
541 ccctagagcc tcaagaagga acacagccct gctgacagct tgattttagg atttctgacc
601 tccagactaa gtgatgccac caaaaagaaa tgaaaaatac aaacttccta ttccatttcc
661 agaaggcaag gttctggatg atatggaagg caatcagtgg gtactgggca agaagattgg
721 ctctggagga tttggattga tatatttagc tttccccaca aataaaccag agaaagatgc
781 aagacatgta gtaaaagtgg aatatcaaga aaatggcccg ttattttcag aacttaaatt
841 ttatcagaga gttgcaaaaa aagactgtat caaaaagtgg atagaacgca aacaacttga
901 ttatttagga attcctctgt tttatggatc tggtctgact gaattcaagg gaagaagtta
961 cagatttatg gtaatggaaa gactaggaat agatttacag aagatctcag gccagaatgg
1021 tacctttaaa aagtcaactg tcctgcaatt aggtatccga atgttggatg tactggaata
1081 tatacatgaa aatgaatatg ttcatggtga tgtaaaagca gcaaatctac ttttgggtta
1141 caaaaatcca gaccaggttt atcttgcaga ttatggactt tcctacagat attgtcccaa
1201 tgggaaccac aaacagtatc aggaaaatcc tagaaaaggc cataatggga caatagagtt
1261 taccagcttg gatgcccaca agggagtagc cttgtccaga cgaagtgacg ttgagatcct
1321 cggctactgc atgctgcggt ggttgtgtgg gaaacttccc tgggaacaga acctgaagga
1381 ccctgtggct gtgcagactg ctaaaacaaa tctgttggac gagctccccc agtcagtgct
1441 taaatgggct ccttctggaa gcagttgctg tgaaatagcc caatttttgg tatgtgctca
1501 tagtttagca tatgatgaaa agccaaacta tcaagccctc aagaaaattt tgaaccctca
1561 tggaatacct ttaggaccac tggacttttc cacaaaagga cagagtataa atgtccatac
1621 tccaaacagt caaaaagttg attcacaaaa ggctgcaaca aagcaagtca acaaggcaca
1681 caataggtta atcgaaaaaa aagtccacag tgagagaagc gctgagtcct gtgcaacatg
1741 gaaagtgcag aaagaggaga aactgattgg attgatgaac aatgaagcag ctcagtttag
1801 gtagaagctt aggctattga tttgaaccca ctattttttc taatgaaagc acaaggagaa
1861 gacagaaata tcaagagtct caagaacctt tgaatgaagt aaacagtttc ccacaaaaaa
1921 tcagctatac acaattccca aactcatttt atgagcctca tcaagatttt accagtccgg
1981 atatattc
//