LOCUS AK292718 3022 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76961 complete cds, highly similar to Homo
sapiens SH2 domain containing 3C (SH2D3C), transcript variant 2,
mRNA.
ACCESSION AK292718
VERSION AK292718.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3022)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3022
/clone="THYMU3046634"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000425515"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 14..2596
/codon_start=1
/note="highly similar to Homo sapiens SH2 domain
containing 3C (SH2D3C), transcript variant 2, mRNA"
/protein_id="BAF85407.1"
/transl_table=1
/translation="MTEGTKKTSKKFKFFKFKGFGSLSNLPRSFTLRRSSASISRQSH
LEPDTFEATQDDMVTVPKSPPAYARSSDMYSHMCTMPRPSIKKAQNSQAARQAQEAGP
KPNLVPGGVPDPPGLEAAKEVMVKATGPLEDTPAMEPNPSAVEVDPIRKPEVPTGDVE
EERPPRDVHSERAAGEPEAGSDYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSH
AWYHGRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQALHFKINKVVVKAGE
SYTHIQYLFEQESFDHVPALVRYHVGSRKAVSEQSGAIIYCPVNRIFPLRYLEASYGL
GQGSSKPASPVSPSGPKGSHMKRRSVTMTDGLTADKVTRSDGCPTSTSLPRPRDSIRS
CALSMDQIPDLHSPMSPISESPSSPAYSTVTRVHAAPAAPSATALPASPVARRSSEPQ
LCPGSAPKTHGESDKGPHTSPSHTLGKASPSPSLSSYSDPDSGHYCQLQPPVRGSREW
AATETSSQQARSYGERLKELSENGAPEGDWGKTFTVPIVEVTSSFNPATFQSLLIPRD
NRPLEVGLLRKVKELLAEVDARTLARHVTKVDCLVARILGVTKEMQTLMGVRWGMELL
TLPHGRQLRLDLLERFHTMSIMLAVDILGCTGSAEERAALLHKTIQLAAELRGTMGNM
FSFAAVMGALDMAQISRLEQTWVTLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLSN
TTFPHVLPLITLLECDSAPPEGPEPWGSTEHGVEVVLAHLEAARTVAHHGGLYHTNAE
VKLQGFQARPELLEVFSTEFQMRLLWGSQGASSSQARRYEKFDKVLTALSHKLEPAVR
SSEL"
BASE COUNT 649 a 999 c 838 g 536 t
ORIGIN
1 acaatttgcc aagatgacag aggggaccaa gaagaccagc aaaaagttca agttcttcaa
61 gttcaagggc tttgggagtc tctccaacct ccctcggtcc ttcactctga gacgatcctc
121 agcttccatc agtaggcagt cccatttgga gcctgacacc tttgaagcca cgcaggatga
181 catggtgacg gtgcccaaga gtcccccagc ctatgcccgc tccagtgaca tgtacagcca
241 catgtgcacc atgcctcgcc ccagcatcaa gaaagcacag aactcacagg ctgcccggca
301 ggcccaggag gcgggtccca agcccaactt ggtacccgga ggtgtacccg accccccagg
361 cttggaggca gccaaagagg tgatggtgaa ggccactggc cctctagagg acaccccagc
421 aatggaaccc aacccttcag cagtggaggt agaccccatc agaaagcctg aggtccccac
481 aggagacgta gaagaggaga gacctcccag ggacgtgcac tcagaaaggg ctgctggaga
541 gccagaggct ggcagcgact atgtgaagtt ctccaaggag aagtacatcc tggactcatc
601 gccagagaaa ctccacaagg aattggagga ggagctcaaa ctcagcagca cggatctccg
661 cagccatgcc tggtaccatg gccgcatccc ccgagaggtc tcggagacct tggtacaacg
721 caacggcgac ttcctcatcc gggactcact caccagcctg ggcgactatg tgctcacgtg
781 ccgctggcgc aaccaggcct tgcacttcaa gatcaacaag gtggtggtga aggcaggcga
841 gagctacaca cacatccagt acctgtttga gcaggagagc tttgaccacg tgcccgccct
901 cgtgcgctat catgtgggca gccgcaaggc tgtgtcagag cagagtggtg ccatcatcta
961 ctgcccggtg aaccgcatct tcccactgcg ctacctcgag gccagctatg gcctgggaca
1021 ggggagtagc aagcctgcta gccccgtcag cccctcaggc cccaagggca gccacatgaa
1081 gcggcgcagc gtcaccatga ccgatgggct cactgctgac aaggtcaccc gcagcgatgg
1141 ctgccccacc agtacgtcgc tgccccgccc tcgggactcc atccgcagct gtgccctcag
1201 catggaccag atcccagacc tgcactcacc catgtcgccc atctccgaga gccctagctc
1261 ccctgcctac agcactgtaa cccgtgtcca tgccgcccct gcagcccctt ctgccacagc
1321 attgcctgcc tcccctgtcg cccgccgttc cagtgagccc cagctgtgtc ccggaagtgc
1381 cccaaagacc catggggagt cagacaaggg cccccacacc agcccctccc acacccttgg
1441 caaggcctcc ccgtcaccat cactcagcag ctacagtgac ccggactctg gccactactg
1501 ccagctccag cctcccgtgc gtggcagccg agagtgggca gcgactgaga cctccagcca
1561 gcaggccagg agctatgggg agaggctaaa ggaactgtca gaaaatgggg cccctgaagg
1621 ggactggggc aagaccttca cagtccccat cgtggaagtc acttcttcct tcaacccggc
1681 caccttccag tcactactga tccccaggga taaccggcca ctggaggtgg gccttctgcg
1741 caaggtcaag gagctgctgg cagaagtgga tgcccggacg ctggcccggc atgtcaccaa
1801 ggtggactgc ctggttgcta ggatactggg cgttaccaag gagatgcaga ccctaatggg
1861 agtccgctgg ggcatggaac tgctcaccct cccccatggc cggcagctac gcctagacct
1921 gctggaaagg ttccacacca tgtccatcat gctggccgtg gacatcctgg gctgcaccgg
1981 ctctgcggag gagcgggcag cgctgctgca caagaccatt cagctggcgg ccgagctgcg
2041 ggggactatg ggcaacatgt tcagcttcgc ggcggtcatg ggtgccctgg acatggctca
2101 gatttctcgg ctggagcaga catgggtgac cctgcggcag cgacacacag agggtgccat
2161 cctgtacgag aagaagctca agccttttct caagagcctc aacgagggca aagaaggccc
2221 gccgctgagc aacaccacgt ttcctcatgt gctgcccctc atcaccctgc tggagtgtga
2281 ctcggcccca ccagagggcc ctgagccctg gggcagcacg gagcacggcg tggaggtggt
2341 gctggctcac ctggaggccg cccgcacagt ggcacaccac ggaggcctgt accacaccaa
2401 tgctgaagtc aagctgcagg ggttccaggc ccggccggag ctcctggagg tgttcagcac
2461 ggagttccag atgcgccttc tctggggcag tcagggtgcc agcagcagcc aggcccggcg
2521 ctatgagaag ttcgacaagg tcctcactgc cctgtcccac aagctggaac ctgctgtccg
2581 ctccagcgag ctgtgacccc agggacattt cccctctgca gctgcggaca gcgtcagggg
2641 cagaggggca cacaactttc cccagagcac cccaaggaca ctgtgatcaa cccgagaatg
2701 ttctgggttc aactcaagca tctcccttgc acctccaggg tcctgcgtgg actctgggtt
2761 ccatcccacc tgctacatgc tcaccggtct ccattgagga agaacaggaa cgccggttcc
2821 cccaccagct tttgctgctc cccttcctgc tggggttccc tgttttcgag ccatgggagg
2881 caggctgctc acgcctcctc actctctgtc tgtccctcac caacaccaag gcctccatct
2941 cactgtaaat aagtctctgt tctgtaaata gatgtacaga agccatgtta tttctttcat
3001 ataataaact tttatgactc tt
//