LOCUS AK292707 1905 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76462 complete cds, highly similar to Homo
sapiens heterogeneous nuclear ribonucleoprotein D (AU-rich element
RNA binding protein 1, 37kDa) (HNRPD), transcript variant 2, mRNA.
ACCESSION AK292707
VERSION AK292707.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1905)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1905
/clone="THYMU3038466"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000425504"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 314..1324
/codon_start=1
/note="highly similar to Homo sapiens heterogeneous
nuclear ribonucleoprotein D (AU-rich element RNA binding
protein 1, 37kDa) (HNRPD), transcript variant 2, mRNA"
/protein_id="BAF85396.1"
/transl_table=1
/translation="MSEEQFGGDGAAAAATAAVGGSAGEQEGAMVAATQGAAAAAGSG
AGTGGGTASGGTEGGSAESEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFG
EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKE
PVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVK
KIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRARGRGGGPSQNWNQGYS
NYWNQGYGNYGYNSQGYGGYGGYDYTGYNNYYGYGDYSNQQSGYGKVSRRGGHQNSYK
PY"
BASE COUNT 528 a 363 c 554 g 460 t
ORIGIN
1 gtcggccatt ttaggtggtc cgcggcggcg ccattaaagc gaggaggagg cgagagcggc
61 cgccgctggt gcttattctt ttttagtgca gcgggagaga gcgggagtgt gcgccgcgcg
121 agagtgggag gcgaaggggg caggccaggg agaggcgcag gagcctttgc agccacgcgc
181 gcgccttccc tgtcttgtgt gcttcgcgag gtagagcggg cgcgcggcag cggcggggat
241 tactttgctg ctagtttcgg ttcgcggcag cggcgggtgt agtctcggcg gcagcggcgg
301 agacactagc actatgtcgg aggagcagtt cggcggggac ggggcggcgg cagcggcaac
361 ggcggcggta ggcggctcgg cgggcgagca ggagggagcc atggtggcgg cgacacaggg
421 ggcagcggcg gcggcgggga gcggagccgg gaccgggggc ggaaccgcgt ctggaggcac
481 cgaagggggc agcgccgagt cggagggggc gaagattgac gccagtaaga acgaggagga
541 tgaagggaaa atgtttatag gaggccttag ctgggacact acaaagaaag atctgaagga
601 ctacttttcc aaatttggtg aagttgtaga ctgcactctg aagttagatc ctatcacagg
661 gcgatcaagg ggttttggct ttgtgctatt taaagaatcg gagagtgtag ataaggtcat
721 ggatcaaaaa gaacataaat tgaatgggaa ggtgattgat cctaaaaggg ccaaagccat
781 gaaaacaaaa gagccggtta aaaaaatttt tgttggtggc ctttctccag atacacctga
841 agagaaaata agggagtact ttggtggttt tggtgaggtg gaatccatag agctccccat
901 ggacaacaag accaataaga ggcgtgggtt ctgctttatt acctttaagg aagaagaacc
961 agtgaagaag ataatggaaa agaaatacca caatgttggt cttagtaaat gtgaaataaa
1021 agtagccatg tcgaaggaac aatatcagca acagcaacag tggggatcta gaggaggatt
1081 tgcaggaaga gctcgtggaa gaggtggtgg ccccagtcaa aactggaacc agggatatag
1141 taactattgg aatcaaggct atggcaacta tggatataac agccaaggtt acggtggtta
1201 tggaggatat gactacactg gttacaacaa ctactatgga tatggtgatt atagcaacca
1261 gcagagtggt tatgggaagg tatccaggcg aggtggtcat caaaatagct acaaaccata
1321 ctaaattatt ccatttgcaa cttatcccca acaggtatgt tctaaaaata gttttttttt
1381 ttgtcattta caatagtagt ttttataatc tatattgttc ataaaataat gcttaattta
1441 agagtttcac agcacccaga agtgcttacc atattataac atagtgactt tcaaagatat
1501 gtaacacagg tgctcttaag cttttgcctt tttgtcctat tattaacaag tcagtaaagt
1561 taacaggtaa agtactgcta atgggtacaa attaaggaat tgcagcaaaa aagtattgcc
1621 tactaactct gacattatac cttgtttgta cccgccagcg ggaacttcat tgcaggccct
1681 gtgtcgcgct gacttcacga ttctcacagg cccgctcaat gcggacaggg tacgagatgc
1741 tcacgctctc gaatgctgcc gtttggtatg gtctcttcca acatcctgta tcagcattat
1801 aaaataaaat ggatacttca agctttgcct tcacttattt ctttgctttt taaaaactat
1861 ttgtaatgta attttaatgc attttttaca ggcccagtaa tggtt
//