LOCUS AK292704 2295 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76332 complete cds, highly similar to Homo
sapiens CD6 antigen (CD6), mRNA.
ACCESSION AK292704
VERSION AK292704.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2295)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2295
/clone="THYMU3034403"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000425501"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 102..2108
/codon_start=1
/note="highly similar to Homo sapiens CD6 antigen (CD6),
mRNA"
/protein_id="BAF85393.1"
/transl_table=1
/translation="MWLFFGITGLLTAALSGHPSPAPPDQLNTSSAESELWEPGERLP
VRLTNGSSSCSGTVEVRLEASWEPACGALWDSRAAEAVCRALGCGGAEAASQLAPPTP
ELPPPPAAGNTSVAANATLAGAPALLCSGAEWRLCEVVEHACRSDGRRARVTCAENRA
LRLVDGGGACAGRVEMLEHGEWGSVCDDTWDLEDAHVVCRQLGCGWVVQALPGLHFTP
GRGPIHWDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVCSEHQSWRLTGGADRCEG
QVEVHFRGVWNTVCDSEWYPSEAKVLCQSLGCGTAVERPKGLPHSLSGRMYYSCNGEE
LTLSNCSWRFNNSNLCSQSLAARVLCSASRSLHNLSTPEVPASVQTVTIESSVTVKIE
NKESRELMLLIPSIVLGILLLGSLIFIAFILLRIKGKYALPVMVNHQHLPTTIPAGSN
SYQPVPITIPKEVFMLPIQVQAPPPEDSDSGSDSDYEHYDFSAQPPVALTTFYNSQRH
RVTDEEVQQSRFQMPPLEEGLEELHASHIPTANPGHCITDPPSLGPQYHPRSNSESST
SSGEDYCNSPKSKLPPWNPQVFSSERSSFLEQPPNLELAGTQPAFSAGPPADDSSSTS
SGEWYQNFQPPPQPPSEEQFGCPGSPSPQPDSTDNDDYDDISAA"
BASE COUNT 437 a 779 c 675 g 404 t
ORIGIN
1 agacctgcgc caggggcgca caacggccgt gtccacctcc cggccccaag atggtgcttc
61 ccacaggcag ccacgcgtag cagccagaga cagctccaga catgtggctc ttcttcggga
121 tcactggatt gctgacggca gccctctcag gtcatccatc tccagcccca cctgaccagc
181 tcaacaccag cagtgcagag agtgagctct gggagccagg ggagcggctt ccggtccgtc
241 tgacaaacgg gagcagcagc tgcagcggga cggtggaggt gcggctcgag gcgtcctggg
301 agcccgcgtg cggggcgctc tgggacagcc gcgccgccga ggccgtgtgc cgagcactgg
361 gctgcggcgg ggcggaggcc gcctctcagc tcgccccgcc gacccctgag ctgccgcccc
421 cgcctgcagc cgggaacacc agcgtagcag ctaatgccac tctggccggg gcgcccgccc
481 tcctgtgcag cggcgccgag tggcggctct gcgaggtggt ggagcacgcg tgccgcagcg
541 acgggaggcg ggcccgtgtc acctgtgcag agaaccgcgc gctgcgcctg gtggacggtg
601 gcggcgcctg cgccggccgc gtggagatgc tggagcatgg cgagtgggga tcagtgtgcg
661 atgacacttg ggacctggag gacgcccacg tggtgtgcag gcaactgggc tgcggctggg
721 tagtccaggc cctgcccggc ttgcacttca cgcccggccg cgggcctatc cactgggacc
781 aggtgaactg ctcgggggcc gaagcttacc tgtgggactg cccggggctg ccaggacagc
841 actactgcgg ccacaaagag gacgcgggcg tggtgtgctc agagcaccag tcctggcgcc
901 tgacaggggg cgctgaccgc tgcgaggggc aggtggaggt acacttccga ggggtctgga
961 acacagtgtg tgacagtgag tggtacccat cggaggccaa ggtgctctgc cagtccttgg
1021 gctgtggaac tgcggttgag aggcccaagg ggctgcccca ctccttgtcc ggcaggatgt
1081 actactcatg caatggggag gagctcaccc tctccaactg ctcctggcgg ttcaacaact
1141 ccaacctctg cagccagtcg ctggcagcca gggtcctctg ctcagcttcc cggagtttgc
1201 acaatctgtc cactcccgaa gtccctgcaa gtgttcagac agtcactata gaatcttctg
1261 tgacagtgaa aatagagaac aaggaatctc gggagctaat gctcctcatc ccctccatcg
1321 ttctgggaat tctcctcctt ggctccctca tcttcatagc cttcatcctc ttgagaatta
1381 aaggaaaata tgccctcccc gtaatggtga accaccagca cctacccacc accatcccgg
1441 cagggagcaa tagctatcaa ccggtcccca tcaccatccc caaagaagtt ttcatgctgc
1501 ccatccaggt ccaggccccg ccccctgagg actcagactc tggctcggac tcagactatg
1561 agcactatga cttcagcgcc cagcctcctg tggccctgac caccttctac aattcccagc
1621 ggcatcgggt cacagatgag gaggtccagc aaagcaggtt ccagatgcca cccttggagg
1681 aaggacttga agagttgcat gcctcccaca tcccaactgc caaccctgga cactgcatta
1741 cagacccgcc atccctgggc cctcagtatc acccgaggag caacagtgag tcgagcacct
1801 cttcagggga ggattactgc aatagtccca aaagcaagct gcctccatgg aacccccagg
1861 tgttttcttc agagaggagt tccttcctgg agcagccccc aaacttggag ctggccggca
1921 cccagccagc cttttcagca gggcccccgg ctgatgacag ctccagcacc tcatccgggg
1981 agtggtacca gaacttccag ccaccacccc agcccccttc ggaggagcag tttggctgtc
2041 cagggtcccc cagccctcag cctgactcca ccgacaacga tgactacgat gacatcagcg
2101 cagcctaggc cggggccagc cgaggctcct ggggtggctc tgaccctctg gcctcctgct
2161 ctacctactc cctttcccct ttcccaccct cccagctcac ctccccatgg agctgagagg
2221 cctcccttgg agagatggaa ggaaacgtta taccttgtac ccctcggtct ccatccatca
2281 agccaaacct gctgc
//