LOCUS AK292682 3211 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ75094 complete cds, highly similar to Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 1, mRNA. ACCESSION AK292682 VERSION AK292682.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3211) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3211 /clone="THYMU3021531" /clone_lib="THYMU3" /db_xref="H-InvDB:HIT000425479" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thymus" CDS 363..2867 /codon_start=1 /note="highly similar to Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 1, mRNA" /protein_id="BAF85371.1" /transl_table=1 /translation="MWTRNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWW LCSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPR DTIYQVPPSYQNQGIYQVPTGHGTQEQEVYQVPPSVRRSIGGTSGPHVGKKVITPVRT GHGYVYEYPSRYQKDVYDIPPSHTTQGVYDIPPSSAKGPVFSVPVGEIKPQGVYDIPP TKGVYAIPPSACRDEAGLREKDYDFPPPMRQAGRPDLRPEGVYDIPPTCTKPAGKDLH VKYNCDIPGAAEPVARRHQSLSPNHPPPQLGQSVGSQNDAYDVPRGVQFLEPPAETSE KANPQERDGVYDVPLHNPPDAKGSRDLVDGINRLSFSSTGSTRSNMSTSSTSSKESSL SASPAQDKRLFLDPDTAIERLQRLQQALEMGVSSLMALVTTDWRCYGYMERHINEIRT AVDKVELFLKEYLHFVKGAVANAACLPELILHNKMKRELQRVEDSHQILSQTSHDLNE CSWSLNILAINKPQNKCDDLDRFVMVAKTVPDDAKQLTTTINTNAEALFRPGPGSLHL KNGPESIMNSTEYPHGGSQGQLLHPGDHKAQAHNKALPPGLSKEQAPDCSSSDGSERS WMDDYDYVHLQGKEEFERQQKELLEKENIMKQNKMQLEHHQLSQFQLLEQEITKPVEN DISKWKPSQSLPTTNSGVSAQDRQLLCFYYDQCETHFISLLNAIDALFSCVSSAQPPR IFVAHSKFVILSAHKLVFIGDTLTRQVTAQDIRNKVMNSSNQLCEQLKTIVMATKMAA LHYPSTTALQEMVHQVTDLSRNAQLFKRSLLEMATF" BASE COUNT 885 a 856 c 802 g 668 t ORIGIN 1 acacatacat atgccactca catccgacgt gtgtggttgc tcagtaggga aatgcttaca 61 gctgcctcta gaagcaagtc cgctcgctgc atggagaggg aaacatgagc atgcagcagg 121 actagctgtc acctcccgcc cgcctgccca gagagggcca gagcgtcggg gaggcaagat 181 gatccaccag cggttccatc ctacacttgg attcagtaag ctgtgaggtc cgtaatgtca 241 gacactggca aacatcatat gttcttcaag tagagttatg aaaacgaaga aactggtcag 301 aagagtaaaa cgccggaatt gtcctttcca acatccagag ctgcatcatt ccttggggca 361 aaatgtggac aaggaatctt atggcaaggg ccttatatga caatgtccca gagtgtgccg 421 aggaactggc ctttcgcaag ggagacatcc tgaccgtcat agagcagaac acagggggac 481 tggaaggatg gtggctgtgc tcattacacg gtcggcaagg cattgtccca ggcaaccggg 541 tgaagcttct gattggtccc atgcaggaga ctgcctccag tcacgagcag cctgcctctg 601 gactgatgca gcagaccttt ggccaacaga agctctatca agtgccaaac ccacaggctg 661 ctccccgaga caccatctac caagtgccac cttcctacca aaatcaggga atttaccaag 721 tccccactgg ccacggcacc caagaacaag aggtatatca ggtgccacca tcagtgcgga 781 gaagcattgg gggaaccagt gggccccacg tgggtaaaaa ggtgataacc cccgtgagga 841 caggccatgg ctacgtatac gagtacccat ccagatacca aaaggacgtc tatgatatcc 901 ctccttctca taccactcaa ggggtatacg acatccctcc ctcatcagca aaaggccctg 961 tgttttcagt tccagtggga gagataaaac ctcaaggggt gtatgacatc ccgcctacaa 1021 aaggggtata tgccattccg ccctctgctt gccgggatga agcagggctt agggaaaaag 1081 actatgactt cccccctccc atgagacaag ctggaaggcc ggacctcaga ccggaggggg 1141 tttatgacat tcctccaacc tgcaccaagc cagcagggaa ggaccttcat gtaaaataca 1201 actgtgacat tccaggagct gcagaaccgg tggctcgaag gcaccagagc ctgtccccga 1261 atcacccacc cccgcaactc ggacagtcag tgggctctca gaacgacgca tatgatgtcc 1321 cccgaggcgt tcagtttctt gagccaccag cagaaaccag tgagaaagca aacccccagg 1381 aaagggatgg tgtttatgat gtccctctgc ataacccgcc agatgctaaa ggctctcggg 1441 acttggtgga tgggatcaac cgattgtctt tctccagtac aggcagcacc cggagtaaca 1501 tgtccacgtc ttccacctcc tccaaggagt cctcactgtc agcctcccca gctcaggaca 1561 aaaggctctt cctggatcca gacacagcta ttgagagact tcagcggctc cagcaggccc 1621 ttgagatggg tgtctccagc ctaatggcac tggtcactac cgactggcgg tgttacggat 1681 atatggaaag acacatcaat gaaatacgca cagcagtgga caaggtggag ctgttcctga 1741 aggagtacct ccactttgtc aagggagctg ttgcaaatgc tgcctgcctc ccggaactca 1801 tcctccacaa caagatgaag cgggagctgc aacgagtcga agactcccac cagatcctga 1861 gtcaaaccag ccatgactta aatgagtgca gctggtccct gaatatcttg gccatcaaca 1921 agccccagaa caagtgtgac gatctggacc ggtttgtgat ggtggcaaag acggtgcccg 1981 atgacgccaa gcagctcacc acaaccatca acaccaacgc agaggccctc ttcagacccg 2041 gccctggcag cttgcatctg aagaatgggc cggagagcat catgaactca acggagtacc 2101 cacacggtgg ctcccaggga cagctgctgc atcctggtga ccacaaggcc caggcccaca 2161 acaaggcact gcccccaggc ctgagcaagg agcaggcccc tgactgtagc agcagtgatg 2221 gttctgagag gagctggatg gatgactacg attacgtcca cctacagggt aaggaggagt 2281 ttgagaggca acagaaagag ctattggaaa aagagaatat catgaaacag aacaagatgc 2341 agctggaaca tcatcagctg agccagttcc agctgttgga acaagagatt acaaagcccg 2401 tggagaatga catctcgaag tggaagccct ctcagagcct acccaccaca aacagtggcg 2461 tgagtgctca ggatcggcag ttgctgtgct tctactatga ccaatgtgag acccatttca 2521 tttcccttct caacgccatt gacgcactct tcagttgtgt cagctcagcc cagcccccgc 2581 gaatcttcgt ggcacacagc aagtttgtca tcctcagtgc acacaaactg gtgttcattg 2641 gagacacgct gacacggcag gtgactgccc aggacattcg caacaaagtc atgaactcca 2701 gcaaccagct ctgcgagcag ctcaagacta tagtcatggc aaccaagatg gccgccctcc 2761 attaccccag caccacggcc ctgcaggaaa tggtgcacca agtgacagac ctttctagaa 2821 atgcccagct gttcaagcgc tctttgctgg agatggcaac gttctgagaa gaaaaaaaag 2881 aggaagggga ctgcgttaac ggttactaag gaaaactgga aatactgtct ggtttttgta 2941 aatgttatct atttttgtag atattttata taaaaatgaa atattttaac attttatggg 3001 tcagacaact ttcagaaatt cagggagctg gagagggaaa tctttttttt tccccctgag 3061 tggttcttat gtatacatag aagtatctga gacataaact gtacagaaaa cttgtccacg 3121 tgcttttgta tgcccatgta ttcatgtttg tttgtagatg tttgtctgat gcatttcatt 3181 aaaaaaaaaa ccatgaatta cgaagcacct t //