LOCUS AK292557 2352 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76454 complete cds, highly similar to Homo
sapiens ring finger protein 184 (RNF184), mRNA.
ACCESSION AK292557
VERSION AK292557.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2352)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2352
/clone="TESTI4039324"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000425354"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 229..1962
/codon_start=1
/note="highly similar to Homo sapiens ring finger protein
184 (RNF184), mRNA"
/protein_id="BAF85246.1"
/transl_table=1
/translation="MNPVNATALYISASRLVLNYDPGDPKAFTEINRLLPYFRQSLSC
CVCGHLLQDPIAPTNSTCQHYVCKTCKGKKMMMKPSCSWCKDYEQFEENKQLSILVNC
YKKLCEYITQTTLARDIIEAVDCSSDILALLNDGSLFCEETEKPSDSSFTLCLTHSPL
PSTSEPTTDPQASLSPMSESTLSIAIGSSVINGLPTYNGLSIDRFGINIPSPEHSNTI
DVCNTVDIKTEDLSDSLPPVCDTVATDLCSTGIDICSFSEDIKPGDSLLLSVEEVLRS
LETVSNTEVCCPNLQPNLEATVSNGPFLQLSSQSLSHNVFMSTSPALHGLSCTAATPK
IAKLNRKRSRSESDSEKVQPLPISTIIRGPTLGASAPVTVKRESKISLQPIATVPNGG
TTPKISKTVLLSTKSMKKSHEHGSKKSHSKTKPGILKKDKAVKEKIPSHHFMPGSPTK
TVYKKPQEKKGCKCGRATQNPSVLTCRGQRCPCYSNRKACLDCICRGCQNSYMANGKK
KLEAFAVPEKALEQTRLTLGINVTSIAVRNANTSTSVINVTGSPVTTFLAASTHDDKS
LDEAIDMRFDC"
BASE COUNT 679 a 513 c 494 g 666 t
ORIGIN
1 atatttttgg tctggaagtc tcagggacgg aggggcgcca aggccccatg tgtgggagaa
61 ttgtttcagc tccacaaact tgcacggatt ttggttactt gtttggccaa tggttcggct
121 ctgatttctt ccgaattgtt gcaaattcgc catcgttccc tggctgctta ctaagttgga
181 tccggaattt cttttcaacc gggagccatt ggtgtcgaag tgtctgcaat gaaccccgtg
241 aatgctactg ctctctacat ttccgcgagc cgcctagtgc tcaactacga ccccggagac
301 cccaaggcgt ttactgagat taacaggctc ttgccttact tccgacagtc cctttcgtgc
361 tgtgtttgcg gacatttgct acaagatcct attgcaccca ccaactccac ctgccaacat
421 tatgtctgca aaacttgtaa aggcaagaaa atgatgatga aaccttcctg tagctggtgc
481 aaagactatg agcagtttga ggaaaacaag cagttaagca tcctagtgaa ctgctacaaa
541 aaactatgcg agtatataac acagactaca ctggcacggg atataataga agcagttgac
601 tgttcttctg atattttggc tttgcttaat gatggatcat tgttttgtga ggagacagaa
661 aaaccctcag attcatcctt tactttgtgt ttgacacatt cccctttacc ttcaacctca
721 gaacccacaa ctgatcctca agctagttta tctccaatgt ctgaaagcac cctcagcatt
781 gctattggca gttctgttat caatggtttg cctacttata atgggctttc aatagataga
841 tttggtataa atattccttc acctgaacat tcaaatacga ttgacgtatg taatactgtt
901 gacataaaaa ctgaggatct gtctgacagc ctgccacccg tttgtgacac agtagccact
961 gacttatgtt ccacaggcat tgatatctgc agtttcagtg aagatataaa acctggagac
1021 tctctgttac tgagtgttga ggaagtactc cgcagcttag aaactgtttc aaatacagag
1081 gtctgttgcc ctaatttgca gccgaacttg gaagccactg tatccaatgg accttttctg
1141 cagctttctt cccagtctct tagccataat gtttttatgt ccaccagtcc tgcacttcat
1201 gggttatcat gtacagcagc aactccgaag atagcaaaat tgaatagaaa acgatccaga
1261 tcagagagtg acagtgagaa agttcagcca cttccaattt ctaccattat ccgaggccca
1321 acactggggg catctgctcc tgtgacagtg aaacgggaga gcaaaatttc tcttcaacct
1381 atagcaactg ttcccaatgg aggcacaaca cctaaaatca gcaaaactgt acttttatct
1441 actaaaagca tgaaaaagag tcatgaacat ggatccaaga aatctcactc taaaaccaag
1501 ccaggtattc ttaaaaaaga caaagcagta aaggaaaaga ttcctagtca tcattttatg
1561 ccaggaagtc ctaccaagac tgtgtacaaa aaaccccagg aaaagaaagg gtgtaaatgt
1621 gggcgtgcta ctcaaaatcc aagtgttctt acatgccgag gccaacgctg cccttgctac
1681 tctaaccgca aagcctgctt agattgtata tgtcgtggct gccaaaactc ctatatggcc
1741 aatgggaaga agaagctgga ggcatttgcc gtgccagaaa aggccttgga gcagaccagg
1801 ctcactttgg gcattaacgt gactagcatt gctgtgcgta acgctaatac cagcaccagt
1861 gtaataaatg tcacagggtc cccagtaacg acgtttttag ctgccagtac acatgatgat
1921 aaaagtttgg atgaagctat agacatgaga ttcgactgtt aaatcagtgg gtcttttaaa
1981 cctactcctg gtagggaaat agctacagtt ttacggcagc tatggttctg ttggtttaac
2041 ttgccggagc tcctgcatat agatcacttg tatcaagtgt tttcattgct aagttatatg
2101 tgttagtgtc ggggaaatag tttgcagata atggaggagt aaccctacaa ctatatgtcc
2161 ttagttctta cagaacctca tagtttgaga acaaagctgg tgcaactgat ttatacaaaa
2221 tgaactttgg caagaaaaat aacattaacc tcattgttta tggccatgct ttgtgcataa
2281 tcaaagttta tgattaaatg taaggaagtg gtatctagtc agtccataaa gattgtgcta
2341 atttttttgt gg
//