LOCUS AK292496 1830 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77514 complete cds, highly similar to Homo
sapiens glycogenin 2, mRNA.
ACCESSION AK292496
VERSION AK292496.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1830)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1830
/clone="TESTI4022190"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000425293"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 191..1603
/codon_start=1
/note="highly similar to Homo sapiens glycogenin 2, mRNA"
/protein_id="BAF85185.1"
/transl_table=1
/translation="MSVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQ
VSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVF
LDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGS
FDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGS
MKPWNYKYNPQSGSVLEQGSVSSSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASP
GHTLCRSDVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDE
TLSLPEGRRSEDMIACPETETPAVITCDPLSQPSPQPADFTETETILQPANKVESVSS
EETFEPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEERRKWEEGRI
DYMGKDAFARIQEKLDRFLQ"
BASE COUNT 400 a 526 c 502 g 402 t
ORIGIN
1 aatcgctgcc ctcggggcct ccagcgccgg ctctgggccg aggcagccag agcgcggaag
61 aggcctggaa atccacgcgg attcccggag acggcgcctc tgctctgcgg gttcgtggcg
121 aggaagtcca cccactgctc ccgggcgcag gtctgcaggt ccgcgcccac tgcccgcggc
181 gccactgacc atgtcggtga ctgatcaggc ttttgtcaca ctagccacca atgacatcta
241 ctgccagggc gccctggtcc tggggcagtc actgaggaga cacaggctga cgaggaagct
301 ggtggtgttg atcactcctc aggtgtccag cctgctcagg gtcatcctct cgaaggtgtt
361 cgatgaagtc attgaagtga atctaatcga tagtgccgac tacatccacc tggcctttct
421 gaagagacct gagctcgggc tcaccctcac caagcttcac tgttggactc tcactcacta
481 cagcaagtgt gtcttcctgg atgcagacac tctggtgctg tccaatgtcg atgagctgtt
541 tgacagggga gagttttctg cggccccgga ccccggatgg ccggattgct tcaatagcgg
601 ggtgtttgtc ttccagcctt ctctccacac gcataaactc ctgctacagc acgccatgga
661 acacggcagc tttgacgggg cagaccaagg cttactgaat agtttcttca ggaactggtc
721 gaccacagac atccacaagc acctgccgtt catctataac ttgagtagta acacgatgta
781 cacttacagc cctgccttca agcaattcgg ttccagtgca aaggtcgtcc actttttggg
841 gtccatgaaa ccttggaact acaagtacaa tccacagagt ggctcggtgt tggagcaagg
901 ctcagtgtcc agcagccagc accaggcggc attccttcat ctctggtgga cggtctacca
961 gaacaacgtg ctgccccttt ataaaagcgt ccaagcgggg gaagcacgcg cgtctcctgg
1021 tcacacactt tgccgcagtg atgtgggggg gccgtgtgcg gattcagcct ctggtgttgg
1081 agagccgtgt gaaaattcaa cacccagtgc gggcgtgccg tgtgcaaatt caccactggg
1141 ttctaaccag cctgctcagg gccttccgga gccgacccag atagtggatg agaccctgtc
1201 cctacctgaa ggacgccgtt cagaagatat gatagcttgt cctgaaactg agactcctgc
1261 cgtgataacg tgtgacccac tgtcccagcc ttcccctcag cctgcagact tcacagagac
1321 tgaaaccatc ttgcagccag caaataaagt cgaaagtgtc tcatccgagg aaaccttcga
1381 accaagccag gaactccctg ctgaggctct cagggacccc agtctgcagg atgcactgga
1441 ggtcgacctg gccgtctctg tttcccagat ctccatcgaa gagaaggtga aggaattgag
1501 ccccgaggaa gagaggagga agtgggagga aggccgtatc gactacatgg ggaaggacgc
1561 gtttgctcgc atccaggaga agctggaccg gttcctgcag taatccggca gctggtgggc
1621 gttgtgtgta gttagacaat gtcctgttgg gtggtcctgt tgcgtggaga tctcctctgg
1681 tcctttcaaa gggaaacgct gttgaacctt gtgcctctat ttatgcttaa tccatttgag
1741 tgcctcacac aaaaaacgta gagtatagaa atccacctta aagcccctcg ccccaacttc
1801 tccaccaacg ccttctgggc tttcttcaga
//