LOCUS AK292444 4150 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78424 complete cds, highly similar to Homo
sapiens ubiquitination factor E4B (UFD2 homolog, yeast) (UBE4B),
mRNA.
ACCESSION AK292444
VERSION AK292444.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4150)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4150
/clone="TESTI4011701"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000425241"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 171..3692
/codon_start=1
/note="highly similar to Homo sapiens ubiquitination
factor E4B (UFD2 homolog, yeast) (UBE4B), mRNA"
/protein_id="BAF85133.1"
/transl_table=1
/translation="MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAA
SAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSR
SQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPFSGPEVSEEQALQ
LVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRD
ENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGG
ASNWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQ
CISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFI
PILQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSP
GCGRELQRLSYLGAFFSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGR
QELFKILHSILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQ
QLSTKIKLETVDPTYIFHPRCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKF
PTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHRE
MLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPL
NSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRN
PYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSE
FYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLE
SLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILT
KQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIY
LQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAK
NARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTL
TESMLEPVPELKEQIQAWMREKQNSDH"
BASE COUNT 1092 a 1052 c 973 g 1033 t
ORIGIN
1 tagtgcctct cgtgttctta ttttttaacc tctgactatg caattctgaa acctccccca
61 ttcgggggac cagacagcct gatagacacc ttccactctc cttcctcccg ccgtggtctc
121 gagaacagaa ggatctctcc ttaacgcctt tcaccattaa gaggaaagcg atggaggagc
181 tgagcgctga tgagattcga cggaggcgcc ttgcacgact tgctggtgga cagacctctc
241 agccaaccac cccactcacc tctccccaga gggagaaccc tccggggcct cccatagcgg
301 catcagcccc aggaccctct cagagtcttg gtctcaatgt ccacaacatg accccagcta
361 cctccccaat aggtgcatca ggagtagccc atcgaagcca gagcagtgaa ggagtcagtt
421 ctctcagcag ctcgccctct aatagccttg aaacgcaatc tcagtctctc tcacgttccc
481 agagcatgga tatcgatggt gtctcatgtg agaaaagcat gtcccaggtg gatgtggatt
541 caggaattga aaacatggag gttgatgaaa atgatcgaag agaaaagcgg agcctcagtg
601 ataaggagcc tttctcgggc cctgaagtgt ctgaagagca ggccttacag ctggtctgta
661 agatcttccg tgtctcttgg aaggaccggg acagagatgt catctttctt tcttctcttt
721 ctgcacagtt taagcagaac ccaaaagaag tattctccga ttttaaggac ttgattggcc
781 agattttaat ggaagtgcta atgatgtcca ctcagaccag agatgaaaac ccatttgcca
841 gtctgacagc cacatcacag ccaattgctg cagcagcacg gtcaccagac agaaatctct
901 tgctaaacac tggctccaat ccaggaacaa gccccatgtt ctgcagcgtg gcttcctttg
961 gtgccagctc tttgtctagt ttgggagcct ctggtggagc aagtaattgg gattcctaca
1021 gtgaccattt caccattgaa acctgcaaag agacagatat gctgaactac ctcatcgagt
1081 gtttcgaccg agttggaata gaggaaaaaa aagcaccaaa gatgtgcagc cagccagcag
1141 tcagccagct tctgagcaac atccgctcac agtgcatatc ccatactgct ttagtactac
1201 aaggctccct aacacagccc aggtccttgc agcagccgtc cttcctagtg ccgtatatgc
1261 tgtgtaggaa tctcccatat ggcttcattc aggaactggt gagaaccact caccaggatg
1321 aagaagtgtt caagcagata tttatcccca ttttacaagg cctggctctt gctgccaaag
1381 agtgctccct cgacagtgac tactttaaat accccctcat ggcactaggt gagctctgtg
1441 aaaccaagtt tgggaagaca caccctgtgt gcaatttggt tgcttctttg cggttgtggt
1501 tgccgaaatc cttaagtcct ggctgtgggc gggagctgca gagactctct tacttagggg
1561 ctttctttag cttctcagtc tttgcagaag atgatgttaa agtggttgaa aaatacttct
1621 cagggcctgc cattaccctg gaaaacactc gtgtggttag ccaatcattg cagcattact
1681 tagagctcgg aaggcaagag ctttttaaga ttctgcatag tattttgtta aatggcgaaa
1741 cccgtgaggc tgctctcagt tacatggcgg ctgtcgtcaa tgccaatatg aagaaagcac
1801 agatgcagac agatgataga ttggtgtcta cagatggatt tatgctgaat ttcctttggg
1861 tactgcagca gctaagtaca aaaatcaagt tagaaacagt tgatcccacg tatatttttc
1921 acccaaggtg tcggattact cttcccaatg atgagacgcg tgtgaatgca acgatggaag
1981 atgtgaatga ctggctgact gaactctatg gcgatcagcc tccattttct gagccgaaat
2041 tccctacgga gtgcttcttt ctcaccctgc atgctcacca cctctctatt ctgcctagtt
2101 gccgtcgcta tatccgcaga ctccgggcta tccgggagct caatagaact gtagaagatt
2161 tgaaaaataa tgaaagccaa tggaaagatt ccccactggc aactagacac cgcgaaatgc
2221 tgaagcgctg taaaactcag cttaagaaac tggtacggtg caaggcctgt gctgatgctg
2281 gcctacttga cgagagcttc ctgagaagat gtctgaattt ttatggcctt ctcattcagc
2341 tgctgctccg catcctggac cccgcatatc ccgatataac actgccttta aattcagatg
2401 tccccaaggt atttgcagcg ttgcctgagt tttatgtaga agatgttgca gaatttttat
2461 tttttattgt acaatactct ccccaggcgc tttatgagcc ctgtactcag gatattgtga
2521 tgttccttgt tgtgatgttg tgcaaccaga actacatccg aaacccatat ttggtggcca
2581 aactggtaga agtcatgttt atgaccaacc ctgctgttca gccacgaacc cagaagtttt
2641 ttgaaatgat tgagaaccat cctctctcca ccaagttgtt ggtaccttcc ctgatgaagt
2701 tttatacaga tgttgagcat accggagcca ccagtgagtt ttatgacaag ttcacaattc
2761 gctatcatat tagcaccatt tttaaaagcc tttggcaaaa catagctcac catggcacct
2821 ttatggagga gttcaactcc gggaagcagt ttgttcgcta tataaacatg ttgataaacg
2881 acacgacgtt tttgctcgat gaaagtctgg agtctctgaa gcgaatccat gaagtgcagg
2941 aagagatgaa gaacaaagaa cagtgggacc agttgccccg ggatcagcag caggctcgtc
3001 agtctcagct tgctcaggat gagcgtgtgt cccgctctta cctcgccctg gccaccgaaa
3061 ccgtggacat gttccacatc ctcacgaagc aggtccagaa gcccttcctc agaccggagc
3121 ttggaccccg attggctgca atgctgaact ttaatcttca gcaactttgt ggccccaagt
3181 gccgtgacct gaaagttgaa aaccctgaga aatacggctt tgaaccaaag aagctgttgg
3241 accaactgac ggatatttac ttacagctgg actgtgctcg gttcgcgaaa gccattgctg
3301 acgaccagag atcctacagt aaggaattgt ttgaagaagt tatttcaaag atgcggaagg
3361 cagggatcaa atccacaata gcaatagaaa aatttaagct gctcgccgag aaagtggagg
3421 agatagtggc caagaacgca cgcgcagaaa tcgactacag cgacgctcct gatgagttca
3481 gagaccctct gatggacacc ctcatgacag accccgtgcg gctgccctct ggcaccatca
3541 tggaccgctc catcatcctg cggcacctgc tcaactcccc cacggacccc ttcaaccggc
3601 agacgctgac agagagcatg ctggaaccag tgccagaact gaaagagcag attcaggcgt
3661 ggatgagaga gaaacagaac agcgatcact aaaccgttcc gccgcccacc ctctgctaga
3721 cacagccaag gccaacgagg caagcagaag cagcggccgc agcgaagctg ccgttcatgt
3781 gttggaggcc aaatgtggca aaccaacccc aggcccaccc agagcgagca aacgctgaga
3841 cctgaaagga catggatgag aagaggagcc cgcttcctgt acatatattt aagtgacaaa
3901 cacggtcaaa agcttaaggg acaggtttta tggttgcttg tgtaataaag catgtccttc
3961 gtatgtcaca gtttggggca acggaagtct tttagtgatg gctaatgggt ctgggcagca
4021 tcccttcatg aatttttttt taatccaata tccgttgatt tgattgtgat tagagaacct
4081 tggacatttt gctgctaaag aatctttttt cccctctccc ccttcctgac cctacttgca
4141 ctgctgtgga
//