LOCUS AK292426 1689 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78741 complete cds, highly similar to Homo
sapiens tetratricopeptide repeat domain 4 (TTC4), mRNA.
ACCESSION AK292426
VERSION AK292426.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1689)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1689
/clone="TESTI4007465"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000425223"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 49..1212
/codon_start=1
/note="highly similar to Homo sapiens tetratricopeptide
repeat domain 4 (TTC4), mRNA"
/protein_id="BAF85115.1"
/transl_table=1
/translation="MEQPGQDPTSDDVMDSFLEKFQSQPYRGGFHEDQWEKEFEKVPL
FMTRAPSEIDPRENPDLACLQSIIFDEERSPEEQAKTYKDEGNDYFKEKDYKKAVISY
TEGLKKKCADPDLNAVLYTNRAAAQYYLGNFRSALNDVTAARKLKPCHLKAIIRGALC
HLELKHFAEAVNWCDEGLQIDAKEKKLLEMRAKADKLKRIEQRDVRKANLKEKKERNQ
NEALLQAIKARNIRLSEAACEDEDSASEGLGELFLDGLSTENPHGARLSLDGQGRLSW
PVLFLYPEYAQSDFISAFHEDSRFIDHLMVMFGETPSWDLEQKYCPDNLEVYFEDEDR
AELYRVPAKSTLLQVLQHQRYFVKALTPAFLVCVGSSPFCKNFLRGRKVYQIR"
BASE COUNT 454 a 403 c 433 g 399 t
ORIGIN
1 gctcgcttca cggcgctggg acccgggctg gaaggcaggg catcagctat ggaacaacct
61 gggcaggatc ccacctcaga cgacgtcatg gactcgttcc tggaaaagtt ccagagccag
121 ccttaccgtg gcggctttca tgaggaccag tgggagaagg aatttgaaaa ggtcccccta
181 tttatgacga gagcgccatc agaaattgat cccagggaga atcctgactt ggcttgtctc
241 cagtcaatta tttttgatga ggagcgttct ccagaagaac aggccaagac ctataaagat
301 gagggcaatg attactttaa agaaaaagac tacaagaaag ctgtaatttc atacactgaa
361 ggcttaaaga agaaatgtgc agatcctgat ttgaatgctg tcctttatac caaccgggca
421 gcagcacagt actatctggg caattttcgt tctgctctca atgatgtgac agctgccaga
481 aagctaaaac cctgccacct caaagcaata ataagaggtg ccttatgcca tctggaactg
541 aaacactttg ccgaggccgt gaactggtgt gatgagggac tgcaaataga tgccaaagag
601 aagaagcttc tggaaatgag ggctaaagca gacaagctga agcgaattga acagagggat
661 gtgaggaaag ccaacttgaa agaaaagaag gagaggaatc agaatgaggc tttactccag
721 gccatcaagg ctaggaatat caggctctca gaagctgcct gtgaggatga agattcagcc
781 tcagaaggtc taggtgagct tttcctggat ggactcagca ctgagaaccc ccatggagcc
841 aggctgagtc tagatggcca gggcaggctg agctggcctg tgctctttct gtacccagag
901 tatgcccagt cggacttcat ctctgctttt catgaggact ccaggtttat tgatcatcta
961 atggtgatgt ttggtgaaac accctcttgg gacctagagc aaaaatattg ccctgataat
1021 ttggaggtct actttgagga tgaggacagg gcagaactat accgggtgcc tgccaagagc
1081 accttgctac aggttctaca gcaccagagg tactttgtaa aagccctgac accagcattt
1141 ttggtctgtg taggatcctc tcctttttgc aagaattttc tccgggggag aaaggtgtac
1201 cagatacgat gactaagcca gggcccctgg atctcctccc ttaccctcct ctgctggaaa
1261 cctagcacac ctgaatcagc tggacatact gctggagtcc agtgctttct ttccgtcacc
1321 ctggggatag tccttcctgg catcgtggtg ggggaggagc ctctggcttc cctaaactgc
1381 agcctctctg gctggtcttc actttcctca gttgatataa aactctgggt cttggccatg
1441 atgtccttgg actccatcgc taaagggacc atctgctgca gttaccacag caactgacct
1501 gaacggcacc ctggtctgtg gagatggact caggatccag tgacatgatt ctgaactttt
1561 gtggagtttg acaccttaga gaagctaccc ctcaaactgc acatctacac acaaacaaac
1621 aatgcatagg attccaaggc tttaaagctg agagaccctg gcctcaagtt atttcatgcg
1681 cacagaggg
//