LOCUS AK292403 3111 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77602 complete cds, highly similar to Homo
sapiens endoplasmic reticulum to nucleus signalling 1 (ERN1),
transcript variant 1, mRNA.
ACCESSION AK292403
VERSION AK292403.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3111)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3111
/clone="TESTI4001645"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000425200"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 140..3073
/codon_start=1
/note="highly similar to Homo sapiens endoplasmic
reticulum to nucleus signalling 1 (ERN1), transcript
variant 1, mRNA"
/protein_id="BAF85092.1"
/transl_table=1
/translation="MPARRLLLLLTLLLPGLGIFGSTSTVTLPETLLFVSTLDGSLHA
VSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE
LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLCPSTSLLYLGRTE
YTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW
IQNYASPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYPFPKETEA
KSKLTPTLYVGKYSTSLYASPSMVHEGVAVVPRGSTLPLLEGPQTDGVTIGDKGECVI
TPSTDVKFDPGLKSKNKLNYLRNYWLLIGHHETPLSASTKMLERFPNNLPKHRENVIP
ADSEKKSFEEVINLVDQTSENAPTTVSRDVEEKPAHAPARPEAPVDSMLKDMATIILS
TFLLIGWVAFIITYPLSMHQQQQLQHQQFQKELEKIQLLQQQQQQLPFHPPGDTAQDG
ELLDTSGPYSESSGTSSPSTSPRASNHSLCSGSSASKAGSSPSLEQDDGDEETSVVIV
GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPN
VIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL
NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP
EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE
KHEDVIARELIEKMIAMGPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKESLDG
PIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRATRNKKHHYREL
PAEVRETLGSLPDDFVCYFTSRFPHLLAHTYRAMELCSHERLFQPYYFHEPPEPQPPV
TPDAL"
BASE COUNT 704 a 938 c 847 g 622 t
ORIGIN
1 agggccggga atgggggtgc cgccgctgcc tagtcagttc tgcgtccgct gaggctcggt
61 caccgcctcg ctgtcgtcgc ggcgcccccg ccccgtcctc tgtccgtacc gcccccggag
121 ccagggccga gtcctcgcca tgccggcccg gcggctgctg ctgctgctga cgctgctgct
181 gcccggcctc gggatttttg gaagtaccag cacagtgacg cttcctgaaa ccttgttgtt
241 tgtgtcaacg ctggatggaa gtttgcatgc tgtcagcaag aggacaggct caatcaaatg
301 gactttaaaa gaagatccag tcctgcaggt cccaacacat gtggaagagc ctgcctttct
361 cccagatcct aatgatggca gcctgtatac gcttggaagc aagaataatg aaggcctgac
421 gaaacttcct tttaccatcc cagaattggt gcaggcatcc ccatgccgaa gttcagatgg
481 aatcctctac atgggtaaaa agcaggacat ctggtatgtt attgacctcc tgaccggaga
541 gaagcagcag actttgtcat cggcctttgc agatagtctc tgcccatcaa cctctcttct
601 gtatcttggg cgaacagaat acaccatcac catgtacgac accaaaaccc gagagctccg
661 gtggaatgcc acctactttg actatgcggc ctcactgcct gaggacgacg tggactacaa
721 gatgtcccac tttgtgtcca atggtgatgg gctggtggtg actgtggaca gtgaatctgg
781 ggacgtcctg tggatccaaa actacgcctc ccctgtggtg gccttttatg tctggcagcg
841 ggagggtctg aggaaggtga tgcacatcaa tgtcgctgtg gagaccctgc gctatctgac
901 cttcatgtct ggggaggtgg ggcgcatcac aaagtggaag tacccgttcc ccaaggagac
961 agaggccaag agcaagctga cgcccactct gtatgttggg aaatactcta ccagcctcta
1021 tgcctctccc tcaatggtac acgagggggt tgctgtcgtg ccccgcggca gcacacttcc
1081 tttgctggaa gggccccaga ctgatggcgt caccatcggg gacaaggggg agtgtgtgat
1141 cacgcccagc acggacgtca agtttgatcc cggactcaaa agcaagaaca agctcaacta
1201 cttgaggaat tactggcttc tgataggaca ccatgaaacc ccactgtctg cgtctaccaa
1261 gatgctggag agatttccca acaatctacc caaacatcgg gaaaatgtga ttcctgctga
1321 ttcagagaaa aagagctttg aggaagttat caacctggtt gaccagactt cagaaaacgc
1381 acctaccacc gtgtctcggg atgtggagga gaagcccgcc catgcccctg cccggcccga
1441 ggcccccgtg gactccatgc ttaaggacat ggctaccatc atcctgagca ccttcctgct
1501 gattggctgg gtggccttca tcatcaccta tcccctgagc atgcatcagc agcagcagct
1561 ccagcaccag cagttccaga aggaactgga gaagatccag ctcctgcagc agcagcagca
1621 gcagctgccc ttccacccac ctggagacac ggctcaggac ggcgagctcc tggacacgtc
1681 tggcccgtac tcagagagct cgggcaccag cagccccagc acgtccccca gggcctccaa
1741 ccactcgctc tgctccggca gctctgcctc caaggctggc agcagcccct ccctggaaca
1801 agacgatgga gatgaggaaa ccagcgtggt gatagttggg aaaatttcct tctgtcccaa
1861 ggatgtcctg ggccatggag ctgagggcac aattgtgtac cggggcatgt ttgacaaccg
1921 cgacgtggcc gtgaagagga tcctccccga gtgttttagc ttcgcagacc gtgaggtcca
1981 gctgttgcga gaatcggatg agcacccgaa cgtgatccgc tacttctgca cggagaagga
2041 ccggcaattc cagtacattg ccatcgagct gtgtgcagcc accctgcaag agtatgtgga
2101 gcagaaggac tttgcgcatc tcggcctgga gcccatcacc ttgctgcagc agaccacctc
2161 gggcctggcc cacctccact ccctcaacat cgttcacaga gacctaaagc cacacaacat
2221 cctcatatcc atgcccaatg cacacggcaa gatcaaggcc atgatctccg actttggcct
2281 ctgcaagaag ctggcagtgg gcagacacag tttcagccgc cgatctgggg tgcctggcac
2341 agaaggctgg atcgctccag agatgctgag cgaagactgt aaggagaacc ctacctacac
2401 ggtggacatc ttttctgcag gctgcgtctt ttactacgta atctctgagg gcagccaccc
2461 ttttggcaag tccctgcagc ggcaggccaa catcctcctg ggtgcctgca gccttgactg
2521 cttgcaccca gagaagcacg aagacgtcat tgcacgtgaa ttgatagaga agatgattgc
2581 gatgggtcct cagaaacgcc cctcagcgaa gcacgtgctc aaacacccgt tcttctggag
2641 cctagagaag cagctccagt tcttccagga cgtgagcgac agaatagaaa aggaatccct
2701 ggatggcccg atcgtgaagc agttagagag aggcgggaga gccgtggtga agatggactg
2761 gcgggagaac atcactgtcc ccctccagac agacctgcgt aaattcagga cctataaagg
2821 tggttctgtc agagatctcc tccgagccac gagaaataag aagcaccact accgggagct
2881 gcctgcagag gtgcgggaga cgctggggtc cctccccgac gacttcgtgt gctacttcac
2941 gtctcgcttc ccccacctcc tcgcacacac ctaccgggcc atggagctgt gcagccacga
3001 gagactcttc cagccctact acttccacga gcccccagag ccccagcccc cagtgactcc
3061 agacgccctc tgagcgaggg cggcccctct gttctggtgg ccccagctgt g
//