LOCUS AK292352 1943 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78294 complete cds, highly similar to Homo
sapiens ornithine decarboxylase 1 (ODC1), mRNA.
ACCESSION AK292352
VERSION AK292352.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1943)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1943
/clone="TESTI2036066"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000425149"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 435..1820
/codon_start=1
/note="highly similar to Homo sapiens ornithine
decarboxylase 1 (ODC1), mRNA"
/protein_id="BAF85041.1"
/transl_table=1
/translation="MNNFGNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVAD
LGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLG
VPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDS
KAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCV
FDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPG
RYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHA
HVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVA
AASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDFPPEVEEQDASTLPVSCAWESGMKRH
RAACASASINV"
BASE COUNT 498 a 405 c 512 g 528 t
ORIGIN
1 cctggcggcc gcgcagcagg tgcaggggcg cagagcctgg gctcgccttg gtacagacga
61 gcgggccccg gccttggcgc cttcagtttc cttccagttt ttattttcgc tgtgtctaca
121 gagcagatga caccaatttg gaaacccgcg agagtgggta gagctaagat agtcttgctg
181 tagtagctgt gatattagat gctcggccat gacttagagg tgtttattta aggactgtga
241 atgactcggt gatttcggaa aagcttggct tagatgaacg gacatacaca ggggagacag
301 ccctaagatt gtcactgctg ttccaagggc acacgcagag ggatttggaa ttcctggaga
361 gttgcctttg tgagaagctg gaaatatttc tttcaattcc atctcttagt tttccatagg
421 aacatcaaga aatcatgaac aactttggta atgaagagtt tgactgccac ttcctcgatg
481 aaggttttac tgccaaggac attctggacc agaaaattaa tgaagtttct tcttctgatg
541 ataaggatgc cttctatgtg gcagacctgg gagacattct aaagaaacat ctgaggtggt
601 taaaagctct ccctcgtgtc accccctttt atgcagtcaa atgtaatgat agcaaagcca
661 tcgtgaagac ccttgctgct accgggacag gatttgactg tgctagcaag actgaaatac
721 agttggtgca gagtctgggg gtgcctccag agaggattat ctatgcaaat ccttgtaaac
781 aagtatctca aattaagtat gctgctaata atggagtcca gatgatgact tttgatagtg
841 aagttgagtt gatgaaagtt gccagagcac atcctaaagc aaagttggtt ttgcggattg
901 ccactgatga ttccaaagca gtctgtcgtc tcagtgtgaa attcggtgcc acgctcagaa
961 ccagcaggct ccttttggaa cgggcgaaag agctaaatat cgatgttgtt ggtgtcagct
1021 tccatgtagg aagcggctgt accgatcctg agaccttcgt gcaggcaatc tctgatgccc
1081 gctgtgtttt tgacatgggg gctgaggttg gtttcagcat gtatctgctt gatattggcg
1141 gtggctttcc tggatctgag gatgtgaaac ttaaatttga agagatcacc ggcgtaatca
1201 acccagcgtt ggacaaatac tttccgtcag actctggagt gagaatcata gctgagcccg
1261 gcagatacta tgttgcatca gctttcacgc ttgcagttaa tatcattgcc aagaaaattg
1321 tattaaagga acagacgggc tctgatgacg aagatgagtc gagtgagcag acctttatgt
1381 attatgtgaa tgatggcgtc tatggatcat ttaattgcat actctatgac cacgcacatg
1441 taaagcccct tctgcaaaag agacctaaac cagatgagaa gtattattca tccagcatat
1501 ggggaccaac atgtgatggc ctcgatcgga ttgttgagcg ctgtgacctg cctgaaatgc
1561 atgtgggtga ttggatgctc tttgaaaaca tgggcgctta cactgttgct gctgcctcta
1621 cgttcaatgg cttccagagg ccgacgatct actatgtgat gtcagggcct gcgtggcaac
1681 tcatgcagca attccagaac cccgacttcc cacccgaagt agaggaacag gatgccagca
1741 ccctgcctgt gtcttgtgcc tgggagagtg ggatgaaacg ccacagagca gcctgtgctt
1801 cggctagtat taatgtgtag atagcactct ggtagctgtt aactgcaagt ttagcttgaa
1861 ttaagggatt tggggggacc atgtaactta attactgcta gttttgaaat gtctttgcaa
1921 gagtagggtc gccatgatgc agc
//