LOCUS AK292286 1562 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76058 complete cds, highly similar to Homo
sapiens deafness locus associated putative guanine nucleotide
exchange factor (DELGEF), mRNA.
ACCESSION AK292286
VERSION AK292286.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1562)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1562
/clone="TESTI2015574"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000425083"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 153..1529
/codon_start=1
/note="highly similar to Homo sapiens deafness locus
associated putative guanine nucleotide exchange factor
(DELGEF), mRNA"
/protein_id="BAF84975.1"
/transl_table=1
/translation="MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLND
FCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCP
IQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA
GLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVL
AGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH
LVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG
ATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG
AGHSLALCQLPAHPALVQDPEVTYLSPDAIEDTESQKAMDKERNWKERQSETSTQSQS
DWSRNGGL"
BASE COUNT 356 a 423 c 437 g 346 t
ORIGIN
1 ctctctcccg gcctgcgggc cgcttcccac cacagacccc gccccgcgcc ctacccatca
61 cgcgtccccg gtccggctcc ggcgctcacc tacccccggc aggcgccgcc cccgtgccgt
121 ccctcccgga agcgccggcg gagcgtcctc gcatggagcg cgagcccagc gcctcggagg
181 ccgcccccgc ggcggccgcg ctcttcgcct ggggtgcaaa tagctatggg caacttggcc
241 tcggccataa ggaagatgtg ctgttgcccc agcaactgaa tgacttctgt aaacccagga
301 gtgtcaggag gatcacagga ggagggggcc actctgcagt tgtcacagat ggaggagacc
361 tctttgtttg tggcctgaac aaagatgggc aactggggct tggtcacaca gaggatatcc
421 catattttac cccctgcaaa tccctctttg gctgtcccat ccaacaggtg gcctgtggct
481 gggattttac gattatgctc acagaaaatg gtcaagttct atcatgtgga tccaactcct
541 ttggccagtt aggagttcct catggacctc gaagatgtgt ggttccccag gccattgagc
601 tccataaaga gaaggttgtt tgtattgctg ctggactgag gcatgcagta gctgctacag
661 cgagtggcat cgtgttccag tgggggactg gtttggcatc atgtggacga cggttgtgcc
721 ctgggcagac tcttccattg tttttcacag caaaggaacc aagcagagtg acaggtctag
781 agaattctaa agcaatgtgt gttcttgctg gctcagacca ctcagcttca ttaacagatg
841 caggagaggt gtatgtttgg ggaagcaaca agcatgggca actggctaat gaggctgctt
901 tccttcctgt gccccagaaa atagaagcac attgtttcca gaatgaaaag gtcactgcca
961 tctggagtgg atggacacac ctggttgctc agacagaaac tggcaagatg tttacctggg
1021 gccgagcaga ctatggtcag ctagggagga agttggagac ttatgaaggc tggaaactag
1081 aaaagcaaga ttcatttctc ccctgttcaa gaccaccgaa cagcatgcct tcatctccgc
1141 attgcttaac tggagcaact gaggtctctt gtggctcaga gcataatttg gcaataattg
1201 gtggagtgtg ttactcttgg ggctggaatg agcatggcat gtgcggagat ggcactgaag
1261 ccaacgtctg ggccccaaag ccggtgcagg ctctgctgtc atcgtcagga ctccttgtgg
1321 gctgtggggc tggccactcc ttggccctct gccagctgcc agctcaccct gcattggtcc
1381 aggaccccga ggtcacctac ctttccccag atgccatcga ggacactgaa tctcagaaag
1441 ccatggacaa agagagaaac tggaaggaaa gacaatcaga aacttcaacc caaagccaat
1501 ctgactggtc cagaaatggg ggactgtgat agagaatctt taataaagtg gcttttccca
1561 cc
//