LOCUS AK292262 2644 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78686 complete cds, highly similar to Homo
sapiens nucleoporin 93kDa (NUP93), mRNA.
ACCESSION AK292262
VERSION AK292262.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2644)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2644
/clone="TESTI2009495"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000425059"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 30..2489
/codon_start=1
/note="highly similar to Homo sapiens nucleoporin 93kDa
(NUP93), mRNA"
/protein_id="BAF84951.1"
/transl_table=1
/translation="MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLR
SRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTLEPLEPVKDTDIQGFL
KNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQ
ESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAGLDDK
SISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFG
NLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAA
SQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYC
IIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGE
SHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQ
SAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMF
LRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEE
AAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISAN
KFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDE
IRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAGM
IPYRTSGDTNARLVQMEVLMN"
BASE COUNT 660 a 637 c 710 g 637 t
ORIGIN
1 cggctgtagc acaaggatct gcatctccaa tggatactga ggggtttggt gagctccttc
61 agcaagctga acagcttgct gctgagactg agggcatctc agagcttccc catgtggaac
121 ggaacttaca ggagatccag caggcgggag agcgcctgcg ttcccgtacc ctaacacgca
181 cgtcccagga gacggcagat gtcaaggcgt cagttctcct cgggtctcgg ggacttgaca
241 tatcccacat ctcccagcga ttggagagtc tgagtgcagc caccaccctt gagcctcttg
301 agcctgtgaa ggacactgac attcagggct tcctgaagaa tgagaaggac aatgccctgc
361 tgtctgccat cgaagagtcc cggaagagga ccttcggcat ggctgaggag taccatcggg
421 agtcaatgtt ggttgagtgg gagcaagtga aacagcgaat tctgcacaca ctgctggcat
481 caggagaaga cgcccttgac tttactcaag aaagcgagcc aagctacatc agtgatgtgg
541 gaccccctgg tcgaagctct ctggataaca tcgagatggc ctatgcgcgg caaatttata
601 tctataatga gaaaattgta aatggacacc tgcagcctaa cctggtggac ctttgtgctt
661 ccgtcgcagg gctggatgat aagagcattt ccgacatgtg gaccatggta aaacaaatga
721 cagacgtgtt gttgacaccg gcaacggatg ccctgaagaa ccgcagcagc gtggaagtgc
781 gcatggagtt tgtcaggcag gccttggcgt accttgagca gagttataag aattacaccc
841 ttgtgactgt ctttggaaat ttgcatcagg cccagctggg cggggtgcct gggacttacc
901 aattggttcg aagtttcctg aacattaaac tgccagctcc cttgcctgga ctacaggatg
961 gagaggtgga aggccatcct gtgtgggcgc taatttacta ctgcatgcgc tgtggagacc
1021 tgcttgccgc ttcacaggta gttaatcgag cccagcacca gctgggagag tttaaaacct
1081 ggttccagga gtacatgaac agcaaggaca gaagattgtc cccagctacg gaaaacaagc
1141 tccggctgca ttaccgtagg gccctcagga acaatacaga tccctacaag cgggccgtgt
1201 actgtatcat tggcagatgt gacgtcaccg acaaccagag tgaagtggcg gacaaaactg
1261 aggattacct gtggctgaag ttgaaccaag tgtgttttga cgacgatggc accagctccc
1321 cacaagacag gctcactctc tcacagttcc agaagcagtt gttggaagac tatggcgagt
1381 cccactttac ggtgaaccag caacccttcc tctacttcca agtcctgttc ctgacagcgc
1441 agtttgaagc agcagttgcc tttcttttcc gcatggagcg gctgcgctgc catgctgtcc
1501 atgtagcact ggtgctgttt gagctgaagc tgcttttaaa gtcctctgga cagagtgctc
1561 agctcctcag ccacgagcct ggtgaccctc cttgcttgcg gcggctgaac ttcgtgcggc
1621 tcctcatgct gtacacccgg aagtttgagt ccacggaccc aagggaggcc ctccagtact
1681 tctatttcct cagggatgag aaagatagtc aaggagaaaa catgtttttg cgctgtgtga
1741 gtgagcttgt gattgaaagc cgagagttcg atatgattct tgggaaacta gagaatgacg
1801 gaagtagaaa gcctggagtc atagataagt ttactagtga cacaaagcct attatcaaca
1861 aagttgcttc tgtggcagaa aataaaggac tgtttgaaga ggcagcaaag ctgtatgacc
1921 ttgccaagaa tgctgacaag gtactggagc tgatgaacaa actgctgagc cctgtcgtcc
1981 cccagatcag tgccccgcaa tccaacaagg agaggctgaa gaacatggca ctctccattg
2041 ccgaacggta tagggctcaa ggaataagcg caaataaatt tgtggactcc acgttctatc
2101 ttcttttgga cttgatcacc ttttttgacg agtatcatag tggtcatatt gatagagctt
2161 ttgatatcat tgagcgcttg aagctggtgc ccctgaatca ggaaagtgtg gaagagagag
2221 tggctgcttt cagaaatttc agtgatgaaa tcaggcacaa cctctcagaa gtgcttcttg
2281 ccaccatgaa catcttgttc acacagttta agaggctcaa ggggacaagt ccatcctcgt
2341 catccaggcc ccagcgagtc atcgaggacc gcgactctca actccgaagt caagcccgca
2401 ctctgattac ctttgctgga atgataccat accgaacgtc tggggacacc aatgcgaggc
2461 tggtgcagat ggaggtcctc atgaattaag tgccatgctt tgtgggagtc tgggtcggca
2521 cactgtcagt acatcaggca catgggccca ctaggctggg gtttctggtt ttgtttctgt
2581 tgtgttttgt attggtttct gtattatgta tttttgtcaa cgccaataaa tttctttgat
2641 ttgt
//