LOCUS AK292246 1363 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78008 complete cds, highly similar to Human
clone pSK1 interferon gamma receptor accessory factor-1 (AF-1)
mRNA.
ACCESSION AK292246
VERSION AK292246.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1363)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1363
/clone="TESTI2005831"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000425043"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 97..1110
/codon_start=1
/note="highly similar to Human clone pSK1 interferon
gamma receptor accessory factor-1 (AF-1) mRNA"
/protein_id="BAF84935.1"
/transl_table=1
/translation="MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAE
QVLSWEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPS
AGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFS
SPFDIADTSTAFFCYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLW
NKSNIFRVGHLSNISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGL
IKYWFHTPPSIPLQIEEYLKDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVL
QTL"
BASE COUNT 328 a 380 c 329 g 326 t
ORIGIN
1 gctcgccatg gcggtttggg cggcgacgtg agcggctccg cggaccccga gcggggcccc
61 ggccgcgacc tgagccgccg ccgagcgccc ggggccatgc gaccgacgct gctgtggtcg
121 ctgctgctgc tgctcggagt cttcgccgcc gccgccgcgg ccccgccaga ccctctttcc
181 cagctgcccg ctcctcagca cccgaagatt cgcctgtaca acgcagagca ggtcctgagt
241 tgggagccag tggccctgag caatagcacg aggcctgttg tctaccaagt gcagtttaaa
301 tacaccgaca gtaaatggtt cacggccgac atcatgtcca taggggtgaa ttgtacacag
361 atcacagcaa cagagtgtga cttcactgcc gccagtccct cagcaggctt cccaatggat
421 ttcaatgtca ctctacgcct tcgagctgag ctgggagcac tccattctgc ctgggtgaca
481 atgccttggt ttcaacacta tcggaatgtg actgtcgggc ctccagaaaa cattgaggtg
541 accccaggag aaggctccct catcatcagg ttctcctctc cctttgacat cgctgatacc
601 tccacggcct ttttttgtta ttatgtccat tactgggaaa aaggaggaat ccaacaggtc
661 aaaggccctt tcagaagcaa ctccatttca ttggataact taaaaccctc cagagtgtac
721 tgtttacaag tccaggcaca actgctttgg aacaaaagta acatctttag agtcgggcat
781 ttaagcaaca tatcttgcta cgaaacaatg gcagatgcct ccactgagct tcagcaagtc
841 atcctgatct ccgtgggaac attttcgttg ctgtcggtgc tggcaggagc ctgtttcttc
901 ctggtcctga aatatagagg cctgattaaa tactggtttc acactccacc aagcatccca
961 ttacagatag aagagtattt aaaagaccca actcagccca tcttagaggc cttggacaag
1021 gacagctcac caaaggatga cgtctgggac tctgtgtcca ttatctcgtt tccggaaaag
1081 gagcaagaag atgttctcca aacgctttga accaaagcat gggcctagcc cactggctcc
1141 ctggaagaga tcaagccatc ggagctgcta gagttctgtc tggactttcc agagaccagt
1201 attccctttt gctgcctcta aaaggcctgt ccctgcagac atgagagaca gcaggtctca
1261 tgggggtgac aagctttttt tttttttctt aaagaatttt caaaatcaaa ttccagaatg
1321 attttacgga gatatcccag gaaaattaag gcttctctta aac
//