LOCUS AK292235 2817 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78608 complete cds, highly similar to Homo
sapiens protein phosphatase, EF-hand calcium binding domain 1
(PPEF1), transcript variant 1, mRNA.
ACCESSION AK292235
VERSION AK292235.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2817)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2817
/clone="TESTI2003488"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000425032"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 481..2442
/codon_start=1
/note="highly similar to Homo sapiens protein
phosphatase, EF-hand calcium binding domain 1 (PPEF1),
transcript variant 1, mRNA"
/protein_id="BAF84924.1"
/transl_table=1
/translation="MGCSSSSTKTRRSDTSLRAALIIQNWYRGYKARLKARQHYALTI
FQSIEYADEQGQMQLSTFFSFMLENYTHIHKEELELRNQSLESEQDMRDRWDYVDSID
VPDSYNGPRLQFPLTCTDIDLLLEAFKEQQILHAHYVLEVLFETKKVLKQMPNFTHIQ
TSPSKEVTICGDLHGKLDDLFLIFYKNGLPSERNPYVFNGDFVDRGKNSIEILMILCV
SFLVYPNDLHLNRGNHEDFMMNLRYGFTKEILHKYKLHGKRILQILEEFYAWLPIGTI
VDNEILVIHGGISETTDLNLLHRVERNKMKSVLIPPTETNRDHDTDSKHNKVGVTFNA
HGRIKTNGSPTEHLTEHEWEQIIDILWSDPRGKNGCFPNTCRGGGCYFGPDVTSKILN
KYQLKMLIRSHECKPEGYEICHDGKVVTIFSASNYYEEGSNRGAYIKLCSGTTPRFFQ
YQVTKATCFQPLRQRVDTMENSAIKILRERVISRKSDLTRAFQLQDHRKSGKLSVSQW
AFCMENILGLNLPWRSLSSNLVNIDQNGNVEYMSSSQNIRIEKPVQEAHSTLVETLYR
YRSDLEIIFNAIDTDHSGLISVEEFRAMWKLFSSHYNVHIDDSQVNKLANIMDLNKDG
SIDFNEFLKAFYVVHRCEDLMKPDVTNLG"
BASE COUNT 892 a 582 c 612 g 731 t
ORIGIN
1 gaagattaca aatgagactg ggaaaccctc ttcaataaga cctgtgtgat gatagattgt
61 gtcctgagcc cgcaggtcag gctgaaagag tcaacaacca gcaaagtgaa gatctaggag
121 tctgttcccc ttgaacctgt gtggacctga tcaaacctcg agggaaaggc tgggagaaca
181 catccctggt cagctgtagg aaagccagag agcatttgag aagaggctga agcttgaatt
241 ttgcaaacac acaagccttc tgcatttccc cagagagaag gtttttttct cgtcttcatt
301 tcctttgaaa cacctggggt gaggaaaagc ctctacattg gccaagcaga agaaacagaa
361 tctatgactg aagaggatcg gctaagagtg gttcctcgca gcttaaaggg aggcactttt
421 cacactctgt cttaaaatca gaagttgaat tcatgaacac atatgattta gatagaagtc
481 atgggatgca gcagttcttc aacgaaaacc aggagatctg acacatcact gagagctgcg
541 ttgatcatcc agaactggta ccgaggttac aaagctcgac tgaaggccag acaacactat
601 gccctcacca tcttccagtc catcgaatat gctgatgaac aaggccaaat gcagttatcc
661 accttctttt ccttcatgtt ggaaaactac acacatatac ataaggaaga gctagaatta
721 agaaatcagt ctcttgaaag cgaacaggac atgagggata gatgggatta tgtggactcg
781 atagatgtcc cagactccta taatggtcct cggctacaat ttcctctcac ttgtacggat
841 attgatttac ttcttgaggc cttcaaggaa caacagatac ttcatgccca ttatgtctta
901 gaggtgctat ttgaaaccaa gaaagtcctg aagcaaatgc cgaatttcac tcacatacaa
961 acttctccct ccaaagaggt aacaatctgt ggtgatttgc atgggaaact ggatgatctt
1021 tttttgatct tctacaagaa tggtctcccc tcagagagga acccgtatgt ttttaatggt
1081 gactttgtag atcgaggaaa gaattccata gagatcctaa tgatcctgtg tgtgagtttt
1141 cttgtctacc ccaatgacct gcacttgaac agagggaacc acgaagattt tatgatgaat
1201 ctgaggtatg gcttcacgaa agaaattttg cataaatata agctacatgg aaaaagaatc
1261 ttacaaatct tggaagaatt ctatgcctgg ctcccaatcg gtacaatcgt tgacaatgaa
1321 atcctggtca tccatggtgg gatatcagag accacagact tgaatttact ccaccgtgta
1381 gagaggaaca agatgaaatc tgtgctgata ccaccaacgg aaacaaacag agaccatgac
1441 actgactcga agcacaataa agtaggtgtg acttttaatg cacatggaag aatcaaaaca
1501 aatggatctc ctactgaaca cttaacagag catgaatggg aacagattat tgatattctg
1561 tggagtgatc ccagaggcaa aaatggctgt tttccaaata cgtgccgagg agggggctgc
1621 tattttggac cagatgttac ttccaagatt cttaataaat accagttgaa gatgctcatc
1681 aggtctcatg aatgtaagcc cgaagggtat gaaatctgtc atgatgggaa ggtggtgact
1741 atattttctg cttctaatta ttatgaagaa ggcagcaatc gaggagctta catcaaacta
1801 tgttctggta caactcctcg atttttccag taccaagtaa ctaaagcaac gtgctttcag
1861 cctcttcgcc aaagagtgga tactatggaa aacagcgcca tcaagatatt aagagagaga
1921 gtgatttcac gaaaaagtga ccttactcgt gctttccaac ttcaagacca cagaaaatca
1981 ggaaaacttt ctgtgagcca gtgggctttt tgcatggaga acattttggg gctgaactta
2041 ccatggagat ccctcagttc gaatctggta aacatagacc aaaatggaaa cgttgaatac
2101 atgtccagct cccagaatat ccgcattgaa aaacctgtac aagaggctca ttctactcta
2161 gttgaaactc tgtacagata cagatctgac ctggaaatta tatttaatgc cattgacact
2221 gatcactcag gcctgatctc cgtggaagaa tttcgtgcca tgtggaaact ttttagttct
2281 cactacaatg ttcacattga tgattcccaa gtcaataagc ttgccaacat aatggacttg
2341 aacaaagatg gaagcattga ctttaatgag tttttaaagg ctttctatgt agtgcataga
2401 tgtgaagact tgatgaaacc tgatgtcacc aaccttggct aaacacaaat gagagcttcc
2461 ctcaggctcc ctgaaacagc taggcccaaa tcacaagtac agtcctttcc aacacccctg
2521 aaattcatag tcagtagcag agaaaagcag atcccaattc atcccacaaa cagatgcata
2581 gtatgggttt tggaagtccc tagcaagctg ttattggtaa gattaggtta aatgtcagta
2641 ataggatttg gtttcagcat tagtacctac atattgccag tgagaaactg ggttggacct
2701 agtggtgttg tcgtgagtgc cacctaacca ggaggccaga gcggtttgaa aacatcctga
2761 aaggaactca tacagcacaa gagaaaacta ctaagcttga catctgtgag tgactga
//