LOCUS AK292172 1860 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75437 complete cds, highly similar to Homo
sapiens TRAF interacting protein (TRIP), mRNA.
ACCESSION AK292172
VERSION AK292172.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1860)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1860
/cell_type="mesenchymal stem cells"
/clone="T1ESE2000978"
/clone_lib="T1ESE2"
/db_xref="H-InvDB:HIT000424969"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from mesenchymal stem cells treated with
trichostatin and 5-azacytidine."
/organism="Homo sapiens"
CDS 95..1504
/codon_start=1
/note="highly similar to Homo sapiens TRAF interacting
protein (TRIP), mRNA"
/protein_id="BAF84861.1"
/transl_table=1
/translation="MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSR
TCPQCRIQVGKRTIINKLFFDLAQEEENVLDAEFLKNELDNVRAELSQKDKEKRDSQV
IIDTLRDTLEERNATVVSLQQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLR
SKMKTMEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKAS
GEVADKLRKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEIMSLKKKLTMLQE
TLNLPPVASETVDRLVLESPAPVEVNLKLRRPSFRDDIDLNATFDVDTPPARPSSSQH
GYYEKLCLEKSHSPIQDVPKKICKGPRKESQLSLGGQSCAGEPDEELVGAFPIFVRNA
ILGQKQPKRPRSESSCSKDVVRTGFDGLGGRTKFIQPTDTVMIRPLPVKPKTKVKQRV
RVKTVPSLFQAKLDTFLWS"
BASE COUNT 466 a 492 c 519 g 383 t
ORIGIN
1 aaaatttgaa gcaagcggag gcgcgggggc gcgtctacga agccggacct gtagcagttt
61 ctttggctgc ctgggcccct tgagtccagc catcatgcct atccgtgctc tgtgcactat
121 ctgctccgac ttcttcgatc actcccgcga cgtggccgcc atccactgcg gccacacctt
181 ccacttgcag tgcctaattc agtggtttga gacagcacca agtcggacct gcccacagtg
241 ccgaatccag gttggcaaaa gaaccattat caataagctc ttctttgatc ttgcccagga
301 ggaggagaat gtcttggatg cagaattctt aaagaatgaa ctggacaatg tcagagccga
361 gctttcccag aaagacaagg agaaacgaga cagccaggtc atcatcgaca ctctgcggga
421 tacgctggaa gaacgcaatg ctactgtggt atctctgcag caggccttgg gcaaggccga
481 gatgctgtgc tccacactga aaaagcagat gaagtactta gagcagcagc aggatgagac
541 caaacaagca caagaggagg cccgccggct caggagcaag atgaagacca tggagcagat
601 tgagcttcta ctccagagcc agcgccctga ggtggaggag atgatccgag acatgggtgt
661 gggacagtca gcggtggaac agctggctgt gtactgtgtg tctctcaaga aagagtacga
721 gaatctaaaa gaggcacgga aggcctcagg ggaggtggct gacaagctga ggaaggattt
781 gttttcctcc agaagcaagt tgcagacagt ctactctgaa ttggatcagg ccaagttaga
841 actgaagtca gcccagaagg acttacagag tgctgacaag gaaatcatga gcctgaaaaa
901 gaagctaacg atgctgcagg aaaccttgaa cctgccacca gtggccagtg agactgtcga
961 ccgcctggtt ttagagagcc cagcccctgt ggaggtgaat ctgaagctcc gccggccatc
1021 cttccgtgat gatattgatc tcaatgctac ctttgatgtg gatactcccc cagcccggcc
1081 ctccagctcc cagcatggtt actacgaaaa actttgccta gagaagtcac actccccaat
1141 tcaggatgtc cccaagaaga tatgcaaagg ccccaggaag gagtcccagc tctcactggg
1201 tggccagagc tgtgcaggag agccagatga ggaactggtt ggtgccttcc ctatttttgt
1261 ccggaatgcc atcctaggcc agaaacagcc caagaggccc aggtcagagt cctcttgcag
1321 caaagatgtg gtaaggacag gcttcgatgg gctcggtggc cggacaaaat tcatccagcc
1381 tactgacaca gtcatgatcc gcccattgcc tgttaagccc aagaccaagg ttaagcagag
1441 ggtgagggtg aagacagtgc cttctctctt ccaggccaag ctggacacct tcctgtggtc
1501 gtgagaacag tgagtctgac caatggccag acacatgcct gcaacttgta ggtcaaggac
1561 tgtccaggca ggggttttgt ggacagagcc ccactttcgg gaccagcctg aggtgtaagg
1621 gcagacaaac aggtgagggt gagtgtggca cccagagact gctcttcctg ccctcaccct
1681 gccccactcc tacgactggg agctgacatg accagcccac tgatcctgtc agcaggtcct
1741 gctcctgttg ccaggctcct gtttatagcc atgatcagat gtggtcagac tctttctggg
1801 cctggagacc acggtcactt gttgactgtc tctgtggacc agagtgcttg aggcatctca
//