LOCUS AK292165 1436 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76924 complete cds, highly similar to Homo
sapiens brix domain containing 1 (BXDC1), mRNA.
ACCESSION AK292165
VERSION AK292165.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1436)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1436
/clone="SYNOV4007082"
/clone_lib="SYNOV4"
/db_xref="H-InvDB:HIT000424962"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 70..990
/codon_start=1
/note="highly similar to Homo sapiens brix domain
containing 1 (BXDC1), mRNA"
/protein_id="BAF84854.1"
/transl_table=1
/translation="MDTLDRVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANAT
VTKVLKDVYALKKPYGVLYKKKNITRPFEDQTSLEFFSKKSDCSLFMFGSHNKKRPNN
LVIGRMYDYHVLDMIELGIENFVSLKDIKNSKCPEGTKSMLIFAGDDFDVTEDYRRLK
SLLIDFFRGPTVSNIRLAGLEYVLHFTALNGKIYFRSYKLLLKKSGCRTPRIELEEMG
PSLDLVLRRTHLASDDLYKLSMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKL
QTRKMKGLKKRPAERITEDHEKKSKRIKKN"
BASE COUNT 482 a 254 c 296 g 404 t
ORIGIN
1 gttccggcgc acgtaatcgc cgagggcacg tgcatgcccc ctggttaaga gttgcaggta
61 gcggtagcga tggacactct ggatcgagta gtaaagccca aaacgaaaag agccaagaga
121 ttccttgaga agagagaacc gaaactcaat gaaaatatta aaaatgccat gctgattaaa
181 gggggaaatg caaatgcaac agtgacaaaa gtacttaaag atgtgtatgc actgaaaaaa
241 ccatacggtg tactatataa aaagaaaaat attacaagac cttttgagga tcagacatca
301 ctggaattct tttcaaagaa gtcagattgt tctttattca tgtttggctc ccataataag
361 aagcggccaa ataatctagt aataggtcgt atgtatgact accatgtgct ggatatgatt
421 gaattaggta ttgagaattt tgtctctcta aaagacatta agaacagtaa atgtcctgag
481 ggaacaaaat ccatgctgat atttgctggc gatgatttcg atgtaacaga agattataga
541 agactaaaaa gtcttcttat tgatttcttc agaggcccca cagtatcaaa tatccgcctg
601 gctggattag agtatgttct gcacttcact gcactgaatg ggaagattta ctttcgaagc
661 tataagttgc tgttgaagaa atctggttgc agaacaccac ggattgaatt ggaagagatg
721 ggaccctcat tggatctggt tctgaggagg acacacctgg catcggatga cctttataaa
781 ttatctatga aaatgccaaa agctctcaag ccaaagaaga agaaaaatat ttcccatgat
841 acttttggta caacttatgg aaggattcat atgcagaagc aagacctaag caaactacaa
901 accaggaaaa tgaaggggtt gaagaagcga cctgcagaaa ggataacaga agaccacgag
961 aaaaagtcaa aaagaattaa aaaaaattga tggaacttag ccagccacta ctgtttcatt
1021 gtgttctact taagagaatt atcaagcgtc aatccattca gagtttctta taagatctta
1081 ttatatattt ttataacatg ataattttac gatatattat tatgaacagt aatatactag
1141 tattaagtgt aaagtaagcc ttttatttga gacattacac cctggtgtgc cattttctct
1201 tgtgatatcc cctgccctcc acaaattctt ctttctcatt gggtggatgg atgggtgagg
1261 agggatctcc ataaccattg ggattttttt gaatttctgg ccttagctaa agaaagccac
1321 agaaagccgg acccgcagga gctgtgtaaa caatctcagt atgaattacc tggaaagtta
1381 acctcctctc ccaacatgga tctacattct gatttttatt ttctactttt attttg
//