LOCUS AK292153 2513 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77777 complete cds.
ACCESSION AK292153
VERSION AK292153.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2513)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2513
/clone="SYNOV4005362"
/clone_lib="SYNOV4"
/db_xref="H-InvDB:HIT000424950"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 129..2219
/codon_start=1
/protein_id="BAF84842.1"
/transl_table=1
/translation="MGFQPPAALLLRLFLLQGILRLLWGDLAFIPPFIRMSGPAVSAS
LVGDTEGVTVSLAVLQDEAGILPIPTCGVLNNETEDWSVTVIPGAVLEVTVRWKRGLD
WCSSNETDSFSESPCILQTLLVSASHNSSCSAHLLIQVEIYANSSLTHNASENVTVIP
NQVYQPLGPCPCNLTAGACDVRCCCDQECSSNLTTLFRRSCFTGVFGGDVNPPFDQLC
SAGTTTRGVPDWFPFLCVQSPLANTPFLGYFYHGAVSPKQDSSFEVYVDTDAKDFADF
GYKQGDPIMTVKKAYFTIPQVSLAGQCMQNAPVAFLHNFDVKCVTNLELYQERDGIIN
AKIKNVALGGIVTPKVIYEEATDLDKFITNTETPLNNGSTPRIVNVEEHYIFKWNNNT
ISEINVKIFRAEINAHQKGIMTQRFVVKFLSYNSGNEEELSGNPGYQLGKPVRALNIN
RMNNVTTLHLWQSAGRGLCTSATFKPILFGENVLSGCLLEVGINENCTQLRENAVERL
DSLIQATHVAMRGNSDYADLSDGWLEIIRVDAPDPGADPLASSVNGMCLDIPAHLSIR
ILISDAGAVEGITQQEILGVETRFSSVNWQYQCGLTCEHKADLLPISASVQFIKIPAQ
LPHPLTRFQINYTEYDCNRNEVCWPQLLYPWTQYYQGELHSQCVAKGLLLLLFLTLAL
FLSNPWTRICKAYS"
BASE COUNT 604 a 616 c 610 g 683 t
ORIGIN
1 atagctccgg gcgttcgctt gcaagatggc ggcggcgggg cagtggctgc tgcgttttcg
61 tgtctgagtc cttcctgggt tctaatgagg gcgcggttct gctgtgcccg gcccgcgagg
121 tctaaggcat gggcttccag cctccggccg ctcttctttt gaggcttttc cttctgcagg
181 gcatcctgag gcttctgtgg ggggacctgg ctttcatccc tccttttatc cgaatgtccg
241 gccctgcggt cagcgcgtcc ctggtcggag acaccgaggg tgtgaccgtg tccctggcag
301 tgctgcagga cgaggcggga atattgccaa ttccgacgtg tggagtgctg aacaatgaga
361 cggaagactg gagcgtgact gtgatccccg gtgcggtgtt ggaagtgaca gtgaggtgga
421 agagaggtct ggactggtgt tcctccaatg agacagattc cttctcagag tccccctgta
481 tcctccagac ccttctggtt tcagcatctc ataattcatc ctgttcagca catctactca
541 ttcaagtgga aatttatgcc aactcttctc tgacccataa tgcctcagag aacgtgactg
601 tcattcctaa ccaggtgtat cagccccttg gcccttgtcc ttgtaattta acagctggag
661 cctgtgatgt tcgctgctgc tgtgaccagg aatgctcatc aaatttaaca acgctgttca
721 gacggtcctg cttcaccggc gtgtttggag gagacgtcaa tcctcctttt gatcagctct
781 gctctgctgg gacgacgaca cgtggtgtcc ccgattggtt tccctttctg tgtgtgcagt
841 ccccccttgc caacacaccc ttccttggtt acttctatca tggtgctgtt tcccccaaac
901 aggactcttc ctttgaagta tatgtggata ctgacgcaaa agactttgca gactttggtt
961 acaaacaagg agatcccatt atgactgtaa agaaggcata ttttactatt ccgcaggtgt
1021 ccctggctgg gcagtgtatg cagaacgccc cagtggcatt tcttcacaat tttgatgtta
1081 aatgcgttac taatttggaa ctataccaag aacgagatgg tattatcaat gcgaagataa
1141 agaatgttgc cttaggaggc atagttacac caaaagtgat ctatgaggaa gcaactgacc
1201 tagacaaatt catcaccaat acagaaactc ctttaaataa cggatcaacc cctagaattg
1261 tgaatgtgga agaacattat attttcaaat ggaataataa taccatcagt gaaataaatg
1321 ttaaaatttt tagggcagag attaatgccc accagaaagg gataatgaca cagagatttg
1381 tagtaaaatt tttaagctat aatagtggta atgaagaaga attatctgga aatccaggtt
1441 accaacttgg caagcctgtc cgagctctaa atatcaacag gatgaataat gtcacgactt
1501 tacatctttg gcaatcggct ggaaggggtc tgtgtacatc agcaactttc aaacccattt
1561 tatttggaga aaatgtactc tctggatgcc tgttagaagt cgggattaat gaaaattgta
1621 ctcagctcag ggagaatgct gttgaaagac ttgattcatt aatacaagcg actcacgttg
1681 caatgagagg caactccgat tacgctgatc ttagtgatgg ctggctcgaa ataatacgtg
1741 tagatgcccc tgatccaggt gcagacccgc tggctagcag tgtgaacggc atgtgcctgg
1801 atattcctgc tcacctgagc atccgcatcc tcatctcgga tgctggcgcg gtggaaggga
1861 ttactcagca ggagatactc ggtgtagaga caaggttctc ctcagtgaac tggcagtacc
1921 agtgtgggct tacctgtgag cacaaggccg accttctccc tatcagtgca tccgtccagt
1981 ttattaaaat tcctgcacag ttaccccacc ccctgacaag attccagatc aattatacag
2041 agtatgactg caacagaaat gaggtgtgtt ggccgcagct tctatatcca tggactcagt
2101 attatcaagg ggagctgcat tctcagtgtg ttgctaaggg cttactgttg ctgttgttcc
2161 tcacattggc cttgttcctc agcaacccct ggaccagaat atgcaaagcc tatagttaga
2221 caaccacctg gcttttattt ttttgagatg gagttttgct cttgttgccc aggctgaagt
2281 gatctcggct caccacaacc tcctcctctt gggttcaagc gattctcctg cctcagcctc
2341 cggagaactg ggattacagg catgcaccac cacgcccggc taattttgta tttttagtag
2401 agacagggtt ccaccgtatt ggccaggctg ctctcgaact cctgacctca tgatccgccc
2461 atcttggcct cccaaagtgc tgagattaca ggcatgagcc accgcacccg gcc
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