LOCUS AK292120 1992 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77922 complete cds, highly similar to Homo
sapiens embryonic ectoderm development (EED), transcript variant
1, mRNA.
ACCESSION AK292120
VERSION AK292120.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1992)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1992
/clone="SYNOV2020198"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000424917"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 456..1781
/codon_start=1
/note="highly similar to Homo sapiens embryonic ectoderm
development (EED), transcript variant 1, mRNA"
/protein_id="BAF84809.1"
/transl_table=1
/translation="MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSI
ESGTNTERPDTPTNTPNAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFN
WHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSH
PLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLW
NIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKE
SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPG
KMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLE
VEDPHKAKCTTLTHHKCGAAIRQTGFSRDSSILIAVCDDASIWRWDRLR"
BASE COUNT 563 a 366 c 544 g 519 t
ORIGIN
1 agcagcgggt cggagatcga aggaacgggc caattgcggc tgaaacgtct ttggaaggag
61 gaagggggtg agggagcatc cctttgagtt tcgcctcttc tcgaggcggt ggtgggaagg
121 gagacatact taatactgcc ctcttaatcc aacggacctt acatcgtgta gactgccggg
181 agggcggcgg gaaaagggca agacgggagt tggggaaggg aaggagccag gaagccgcgc
241 gggagggcgc gcgcgcgcgc ccctttttca gcagtgtggc ggggtcgcac gcacgcccgc
301 ctcggcggct gggcgcgatt tgcgacagtg gggggggcgg tggaggtggc ggcggcagcg
361 gcaactttgc ggcaagctcg ggccgggctt gcttgacggc ggtgtggcgg aggccccgcc
421 ccaggcggca ggaacctgga gggaggcgga ggaatatgtc cgagagggaa gtgtcgactg
481 cgccggcggg aacagacatg cctgcggcca agaagcagaa gctgagcagt gacgagaaca
541 gcaatccaga cctctctgga gacgagaatg atgacgctgt cagtatagaa agtggtacaa
601 acactgaacg ccctgataca cctacaaaca cgccaaatgc acctggaagg aaaagttggg
661 gaaagggaaa atggaagtca aagaaatgca aatattcttt caaatgtgta aatagtctca
721 aggaagatca taaccaacca ttgtttggag ttcagtttaa ctggcacagt aaagaaggag
781 atccattagt gtttgcaact gtaggaagca acagagttac cttgtatgaa tgtcattcac
841 aaggagaaat ccggttgttg caatcttacg tggatgctga tgctgatgaa aacttttaca
901 cttgtgcatg gacctatgat agcaatacga gccatcctct gctggctgta gctggatcta
961 gaggcataat taggataata aatcctataa caatgcagtg tataaagcac tatgttggcc
1021 atggaaatgc tatcaatgag ctgaaattcc atccaagaga tccaaatctt ctcctgtcag
1081 taagtaaaga tcatgcttta cgattatgga atatccagac ggacactctg gtggcaatat
1141 ttggaggcgt agaagggcac agagatgaag ttctaagtgc tgattatgat cttttgggtg
1201 aaaaaataat gtcctgtggt atggatcatt ctcttaaact ttggaggatc aattcaaaga
1261 gaatgatgaa tgcaattaag gaatcttatg attataatcc aaataaaact aacaggccat
1321 ttatttctca gaaaatccat tttcctgatt tttctaccag agacatacat aggaattatg
1381 ttgattgtgt gcgatggtta ggcgatttga tactttctaa gtcttgtgaa aatgccattg
1441 tgtgctggaa acctggcaag atggaagatg atatagataa aattaaaccc agtgaatcta
1501 atgtgactat tcttgggcga tttgattaca gccagtgtga catttggtac atgaggtttt
1561 ctatggattt ctggcaaaag atgcttgcat tgggcaatca agttggcaaa ctttatgttt
1621 gggatttaga agtagaagat cctcataaag ccaaatgtac aacactgact catcataaat
1681 gtggtgctgc tattcgacaa accggtttta gcagggatag cagcattctt atagctgttt
1741 gtgatgatgc cagtatttgg cgctgggatc gacttcgata aaatactttt gcctaatcaa
1801 aattagagtg tgtttgttgt ctgtgtaaaa tagaattaat gtatcttgct agtaagggca
1861 cgtagagcat ttagagttgt ctttcagcat tcaatcaggc tgagctgaat gtagtgatgt
1921 ttacattgtt tacattcttt gtactgtctt cctgctcaga ctctactgct tttaataaaa
1981 atttattttt gt
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