LOCUS AK292111 1549 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75893 complete cds, highly similar to Homo
sapiens caspase 9, apoptosis-related cysteine peptidase (CASP9),
transcript variant alpha, mRNA.
ACCESSION AK292111
VERSION AK292111.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1549)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1549
/clone="SYNOV2014463"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000424908"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 22..1272
/codon_start=1
/note="highly similar to Homo sapiens caspase 9,
apoptosis-related cysteine peptidase (CASP9), transcript
variant alpha, mRNA"
/protein_id="BAF84800.1"
/transl_table=1
/translation="MDEADRRLLRRCRLRLVEELQVDQLWDVLLSRELFRPHMIEDIQ
RAGSGSRRDQARQLIIDLETRGSQALPLFISCLEDTGQDMLASFLRTNRQAAKLSKPT
LENLTPVVLRPEIRKPEVLRPETPRPVDIGSGGFGDVGALESLRGNADLAYILSMEPC
GHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLE
LARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLG
GKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISS
LPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVS
VKGIYKQMPGCFNFLRKKLFFKTS"
BASE COUNT 318 a 426 c 449 g 356 t
ORIGIN
1 agtcttagtt ggctactcgc catggacgaa gcggatcggc ggctcctgcg gcggtgccgg
61 ctgcggctgg tggaagagct gcaggtggac cagctctggg acgtcctgct gagccgcgag
121 ctgttcaggc cccatatgat cgaggacatc cagcgggcag gctctggatc tcggcgggat
181 caggccaggc agctgatcat agatctggag actcgaggga gtcaggctct tcctttgttc
241 atctcctgct tagaggacac aggccaggac atgctggctt cgtttctgcg aactaacagg
301 caagcagcaa agttgtcgaa gccaacccta gaaaacctta ccccagtggt gctcagacca
361 gagattcgca aaccagaggt tctcagaccg gaaacaccca gaccagtgga cattggttct
421 ggaggattcg gtgatgtcgg tgctcttgag agtttgaggg gaaatgcaga tttggcttac
481 atcctgagca tggagccctg tggccactgc ctcattatca acaatgtgaa cttctgccgt
541 gagtccgggc tccgcacccg cactggctcc aacatcgact gtgagaagtt gcggcgtcgc
601 ttctcctcgc tgcatttcat ggtggaggtg aagggcgacc tgactgccaa gaaaatggtg
661 ctggctttgc tggagctggc gcggcaggac cacggtgctc tggactgctg cgtggtggtc
721 attctctctc acggctgtca ggccagccac ctgcagttcc caggggctgt ctacggcaca
781 gatggatgcc ctgtgtcggt cgagaagatt gtgaacatct tcaatgggac cagctgcccc
841 agcctgggag ggaagcccaa gctctttttc atccaggcct gtggtgggga gcagaaagac
901 catgggtttg aggtggcctc cacttcccct gaagacgagt cccctggcag taaccccgag
961 ccagatgcca ccccgttcca ggaaggtttg aggaccttcg accagctgga cgccatatct
1021 agtttgccca cacccagtga catctttgtg tcctactcta ctttcccagg ttttgtttcc
1081 tggagggacc ccaagagtgg ctcctggtac gttgagaccc tggacgacat ctttgagcag
1141 tgggctcact ctgaagacct gcagtccctc ctgcttaggg tcgctaatgc tgtttcggtg
1201 aaagggattt ataaacagat gcctggttgc tttaatttcc tccggaaaaa acttttcttt
1261 aaaacatcat aaggccaggg cccctcaccc tgccttatct tgcaccccaa agctttcctg
1321 ccccaggcct gaaagaggct gaggcctgga ctttcctgca actcaaggac tttgcagccg
1381 gcacagggtc tgctctttct ctgccagtga cagacaggct cttagcagct tccagattga
1441 cgacaagtgc tgaacagtgg aggaagaggg acagatgaat gccgtggatt gcacgtggcc
1501 tcttgagcag tggctggtcc agggctagtg acttgtgtcc catgatccc
//