LOCUS AK292103 1673 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77776 complete cds, highly similar to Homo
sapiens hyaluronan and proteoglycan link protein 3 (HAPLN3), mRNA.
ACCESSION AK292103
VERSION AK292103.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1673)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1673
/clone="SYNOV2010607"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000424900"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 217..1299
/codon_start=1
/note="highly similar to Homo sapiens hyaluronan and
proteoglycan link protein 3 (HAPLN3), mRNA"
/protein_id="BAF84792.1"
/transl_table=1
/translation="MGLLLLVPLLLLPGSYGLPFYNGFYYSNSANDQNLGNGHGKDLL
NGVKLVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVL
VAIGLRHRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVE
LELRGVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQ
DATVQYPIMLPRQPCGGPGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEK
LTLTEAREACQEDDATIAKVGQLFAAWKFHGLDRCDTGWLADGSVRYPVVHPHPNCGP
PEPGVRSFGFPDPQSRLYGVYCYRQH"
BASE COUNT 270 a 509 c 521 g 373 t
ORIGIN
1 aaaaggtgcg cgtgttcctt taaggggctg gtctggcggg agcgcggggg tttttctgct
61 gccgcttcct ttctgccctt ttaatttccc cgaaatcaga ctgctgcctt ggaccgggac
121 agctcgcggc ccccgagagc tctagccgtc gaggagctgc ctggggacgt ttgccctggg
181 gccccagcct ggcccgggtc accctggcat gaggagatgg gcctgttgct cctggtcccg
241 ttgctcctgc tgcccggctc ctacggactg cccttctaca acggcttcta ctactccaac
301 agcgccaacg accagaacct aggcaacggt catggcaaag acctccttaa tggagtgaag
361 ctggtggtgg agacacccga ggagaccctg ttcacctacc aaggggccag tgtgatcctg
421 ccctgccgct accgctacga gccggccctg gtctccccgc ggcgtgtgcg tgtcaaatgg
481 tggaagctgt cggagaacgg ggccccagag aaggacgtgc tggtggccat cgggctgagg
541 caccgctcct ttggggacta ccaaggccgc gtgcacctgc ggcaggacaa agagcatgac
601 gtctcgctgg agatccagga tctgcggctg gaggactatg ggcgttaccg ctgtgaggtc
661 attgacgggc tggaggatga aagcggtctg gtggagctgg agctgcgggg tgtggtcttt
721 ccttaccagt cccccaacgg gcgctaccag ttcaacttcc acgagggcca gcaggtctgt
781 gcagagcagg ctgcggtggt ggcctccttt gagcagctct tccgggcctg ggaggagggc
841 ctggactggt gcaacgcggg ctggctgcag gatgccacgg tgcagtaccc catcatgttg
901 ccccggcagc cctgcggtgg cccgggcctg gcacctggcg tgcgaagcta cggcccccgc
961 caccgccgcc tgcaccgcta tgatgtattc tgcttcgcta ctgccctcaa ggggcgggtg
1021 tactacctgg agcaccctga gaagctgacg ctgacagagg caagggaggc ctgccaggaa
1081 gatgatgcca cgatcgccaa ggtgggacag ctctttgccg cctggaagtt ccatggcctg
1141 gaccgctgcg acactggctg gctggcagat ggtagcgtcc gctaccctgt ggttcacccg
1201 catcctaact gtgggccccc agagcctggg gtccgaagct ttggcttccc cgacccgcag
1261 agccgcttgt acggtgttta ctgctaccgc cagcactagg acctggggcc ctcccctgcc
1321 gcattccctc actggctgtg tatttattga gtggttcgtt ttcccttgtg ggttggagcc
1381 attttaactg tttttatact tctcaattta aattttcttt aaacattttt ttactatttt
1441 ttgtaaagca aacagaaccc aatgcctccc tttgctcctg gatgccccac tccaggaatc
1501 atgcttgctc ccctgggcca tttgcggttt tgtgggcttc tggagggttc cccgccatcc
1561 aggctggtct ccctccctta aggaggttgg tgcccggagt gggcggtggc ctgtctagaa
1621 tgccgccggg agtccgggca tggtgggcac agttctccct gcccctcagc ctg
//