LOCUS AK292088 1539 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78602 complete cds, highly similar to Homo
sapiens homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1 (HERPUD1),
transcript variant 1, mRNA.
ACCESSION AK292088
VERSION AK292088.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1539)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1539
/clone="SYNOV2003466"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000424885"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 99..1274
/codon_start=1
/note="highly similar to Homo sapiens
homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1
(HERPUD1), transcript variant 1, mRNA"
/protein_id="BAF84777.1"
/transl_table=1
/translation="MESETEPEPVTLLVKSPNQRHRDLELSGNRGWSVGHLKAHLSRV
YPERPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVA
ESTEEPAGSNRGQYPEDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFS
GYTPYGWLQLSWFQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQ
FPAENQPANQNAAPQVVVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSV
FLSILYFYSSLSRFLMVMGATVVMYLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNN
NLQEGTDPETEDPNHLPPDRDVLDGEQTSPSFMSTAWLVFKTFFASLLPEGPPAIAN"
BASE COUNT 380 a 405 c 383 g 371 t
ORIGIN
1 agagacgtga acggtcgttg cagagattgc gggcggctga gacgccgcct gcctggcacc
61 taggagcgca gcggagcccc gacaccgccg ccgccgccat ggagtccgag accgaacccg
121 agcccgtcac gctcctggtg aagagcccca accagcgcca ccgcgacttg gagctgagtg
181 gcaaccgcgg ctggagtgtg ggccacctca aggcccacct gagccgcgtc taccccgagc
241 gtccgcgtcc agaggaccag aggttaattt attctgggaa gctgttgttg gatcaccaat
301 gtctcaggga cttgcttcca aagcaggaaa aacggcatgt tttgcatctg gtgtgcaatg
361 tgaagagtcc ttcaaaaatg ccagaaatca acgccaaggt ggctgaatcc acagaggagc
421 ctgctggttc taatcgggga cagtatcctg aggattcctc aagtgatggt ttaaggcaaa
481 gggaagttct tcggaacctt tcttcccctg gatgggaaaa catctcaagg cctgaagctg
541 cccagcaggc attccaaggc ctgggtcctg gtttctccgg ttacacaccc tatgggtggc
601 ttcagctttc ctggttccag cagatatatg cacgacagta ctacatgcaa tatttagcag
661 ccactgctgc atcaggggct tttgttccac caccaagtgc acaagagata cctgtggtct
721 ctgcacctgc tccagcccct attcacaacc agtttccagc tgaaaaccag cctgccaatc
781 agaatgctgc tcctcaagtg gttgttaatc ctggagccaa tcaaaatttg cggatgaatg
841 cacaaggtgg ccctattgtg gaagaagatg atgaaataaa tcgagattgg ttggattgga
901 cctattcagc agctacattt tctgtttttc tcagtatcct ctacttctac tcctccctga
961 gcagattcct catggtcatg ggggccaccg ttgttatgta cctgcatcac gttgggtggt
1021 ttccatttag accgaggccg gttcagaact tcccaaatga tggtcctcct cctgacgttg
1081 taaatcagga ccccaacaat aacttacagg aaggcactga tcctgaaact gaagacccca
1141 accacctccc tccagacagg gatgtactag atggcgagca gaccagcccc tcctttatga
1201 gcacagcatg gcttgtcttc aagactttct ttgcctctct tcttccagaa ggccccccag
1261 ccatcgcaaa ctgatggtgt ttgtgctgta gctgttggag gctttgacag gaatggactg
1321 gatcacctga ctccagctag attgcctctc ctggacatgg caatgatgag tttttaaaaa
1381 acagtgtgga tgatgatatg cttttgtgag caagcaaaag cagaaacgtg aagccgtgat
1441 acaaattggt gaacaaaaaa tgcccaaggc ttctcatgtc tttattctga agagctttaa
1501 tatatactct atgtagttta ataagcactg tacgtagaa
//