LOCUS AK292084 2512 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77583 complete cds, highly similar to Homo
sapiens cartilage acidic protein 1 (CRTAC1), mRNA.
ACCESSION AK292084
VERSION AK292084.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2512)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2512
/clone="SYNOV2001854"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000424881"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 119..2104
/codon_start=1
/note="highly similar to Homo sapiens cartilage acidic
protein 1 (CRTAC1), mRNA"
/protein_id="BAF84773.1"
/transl_table=1
/translation="MAPSADPGMSRMLPFLLLLWFLPITEGSQRAEPMFTAVTNSVLP
PDYDSNPTQLNYGVAVTDVDHDGDFEIVVAGYNGPNLVLKYDRAQKRLVNIAVDERSS
PYYALRDRQGNAIGVTACDIDGDGREEIYFLNTNNAFSGVATYTDKLFKFRNNRWEDI
LSDEVNVARGVASLFAGRSVACVDRKGSGRYSIYIANYAYGNVGPDALIEMDPEASDL
SRGILALRDVAAEAGVSKYTGGRGVSVGPILSSSASDIFCDNENGPNFLFHNRGDGTF
VDAAASAGVDDPHQHGRGVALADFNRDGKVDIVYGNWNGPHRLYLQMSTHGKVRFRDI
ASPKFSMPSPVRTVITADFDNDQELEIFFNNIAYRSSSANRLFRVIRREHGDPLIEEL
NPGDALEPEGRGTGGVVTDFDGDGMLDLILSHGESMAQPLSVFRGNQGFNNNWLRVVP
RTRFGAFARGAKVVLYTKKSGAHLRIIDGGSGYLCEMEPVAHFGLGKDEASSVEVTWP
DGKMVSRNVASGEMNSVLEILYPRDEDTLQDPAPLECGQGFSQQENGHCMDTNECIQF
PFVCPRDKPVCVNTYGSYRCRTNKKCSRGYEPNEDGTACVGTLGQSPGPRPTTPTAAA
ATAAAAAAAGAATAAPVLVDGDLNLGSVVKESCEPSC"
BASE COUNT 517 a 739 c 777 g 479 t
ORIGIN
1 aggctcgagg ccagcccggg accggggctg ggagcaagca ggcggcggcg ccggcggcag
61 aggcggcagc gagcgcccgc ttcccacgcc cctaggcggc ggggccgaga gcgggaggat
121 ggctccgagc gctgaccccg gcatgtccag gatgttaccg ttcctgctgc tgctctggtt
181 tctgcccatc actgaggggt cccagcgggc tgaacccatg ttcactgcag tcaccaactc
241 agttctgcct cctgactatg acagtaatcc cacccagctc aactatggtg tggcagttac
301 tgatgtggac catgatgggg actttgagat cgtcgtggcg gggtacaatg gacccaacct
361 ggttctgaag tatgaccggg cccagaagcg gctggtgaac atcgcggtcg atgagcgcag
421 ctcaccctac tacgcgctgc gggaccggca ggggaacgcc atcggggtca cagcctgcga
481 catcgacggg gacggccggg aggagatcta cttcctcaac accaataatg ccttctcggg
541 ggtggccacg tacaccgaca agttgttcaa gttccgcaat aaccggtggg aagacatcct
601 gagcgatgag gtcaacgtgg cccgtggtgt ggccagcctc tttgccggac gctctgtggc
661 ctgtgtggac agaaagggct ctggacgcta ctctatctac attgccaatt acgcctacgg
721 taatgtgggc cctgatgccc tcattgaaat ggaccctgag gccagtgacc tctcccgggg
781 cattctggcg ctcagagatg tggctgctga ggctggggtc agcaaatata cagggggccg
841 aggcgtcagc gtgggcccca tcctcagcag cagtgcctcg gatatcttct gcgacaatga
901 gaatgggcct aacttccttt tccacaaccg gggcgatggc acctttgtgg acgctgcggc
961 cagtgctggt gtggacgacc cccaccagca tgggcgaggt gtcgccctgg ctgacttcaa
1021 ccgtgatggc aaagtggaca tcgtctatgg caactggaat ggcccccacc gcctctatct
1081 gcaaatgagc acccatggga aggtccgctt ccgggacatc gcctcaccca agttctccat
1141 gccctcccct gtccgcacgg tcatcaccgc cgactttgac aatgaccagg agctggagat
1201 cttcttcaac aacattgcct accgcagctc ctcagccaac cgcctcttcc gcgtcatccg
1261 tagagagcac ggagaccccc tcatcgagga gctcaatccc ggcgacgcct tggagcctga
1321 gggccggggc acagggggtg tggtgaccga cttcgacgga gacgggatgc tggacctcat
1381 cttgtcccat ggagagtcca tggctcagcc gctgtccgtc ttccggggca atcagggctt
1441 caacaacaac tggctgcgag tggtgccacg cacccggttt ggggcctttg ccaggggagc
1501 taaggtcgtg ctctacacca agaagagtgg ggcccacctg aggatcatcg acgggggctc
1561 aggctacctg tgtgagatgg agcccgtggc acactttggc ctggggaagg atgaagccag
1621 cagtgtggag gtgacgtggc cagatggcaa gatggtgagc cggaacgtgg ccagcgggga
1681 gatgaactca gtgctggaga tcctctaccc ccgggatgag gacacacttc aggacccagc
1741 cccactggag tgtggccaag gattctccca gcaggaaaat ggccattgca tggacaccaa
1801 tgaatgcatc cagttcccat tcgtgtgccc tcgagacaag cccgtatgtg tcaacaccta
1861 tggaagctac aggtgccgga ccaacaagaa gtgcagtcgg ggctacgagc ccaacgagga
1921 tggcacagcc tgcgtgggga ctctcggcca gtcaccgggc ccccgcccca ccacccccac
1981 cgctgctgct gccactgccg ctgctgctgc cgctgctgga gctgccactg ctgcaccggt
2041 cctcgtagat ggagatctca atctggggtc ggtggttaag gagagctgcg agcccagctg
2101 ctgagcaggg gtgggacatg aaccagcgga tggagtccag caggggagtg ggaaagtggg
2161 cttgtgctgc tgcctagaca gtagggatgt aaaggcctgg gagctagacc ctccccaagc
2221 ccatccatgc acattactta gctaacaatt agggagactc gtaaggccag gccctgtgct
2281 gggcacatag ctgtgatcac agcagacagg gtcgctgccc tgatggcgct tacattccag
2341 tgggtctaat gaccatatct taggacacag atgtgcccag ggaggtggtg tcactgcaca
2401 ggaagtatga ggactttagt gtcctgagtt caaatcctga ttcaggaact cacaaagcta
2461 tgtgacctta caccagtcac ttaacttgtt agccatccat tatcgcatct gc
//