LOCUS AK292080 1512 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78720 complete cds, highly similar to Homo
sapiens caspase 9, apoptosis-related cysteine peptidase (CASP9),
transcript variant alpha, mRNA.
ACCESSION AK292080
VERSION AK292080.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1512)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1512
/clone="SYNOV2000024"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000424877"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 18..1268
/codon_start=1
/note="highly similar to Homo sapiens caspase 9,
apoptosis-related cysteine peptidase (CASP9), transcript
variant alpha, mRNA"
/protein_id="BAF84769.1"
/transl_table=1
/translation="MDEADRWLLRRCRLRLVEELQVDQLWDVLLSRELFRPHMIEDIQ
RAGSGSRRDQARQLIIDLETRGSQALPLFISCLEDTGQDMLASFLRTNRQAAKLSKPT
LENLTPVVLRPEIRKPEVLRPETPRPVDIGSGGFGDVGALESLRGNADLAYILSMEPC
GHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLE
LARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLG
GKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISS
LPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVS
VKGIYKQMPGCFNFLRKKLFFKTS"
BASE COUNT 312 a 414 c 440 g 346 t
ORIGIN
1 gtagttggct actcgccatg gacgaagcgg atcggtggct cctgcggcgg tgccggctgc
61 ggctggtgga agagctgcag gtggaccagc tctgggacgt cctgctgagc cgcgagctgt
121 tcaggcccca tatgatcgag gacatccagc gggcaggctc tggatctcgg cgggatcagg
181 ccaggcagct gatcatagat ctggagactc gagggagtca ggctcttcct ttgttcatct
241 cctgcttaga ggacacaggc caggacatgc tggcttcgtt tctgcgaact aacaggcaag
301 cagcaaagtt gtcgaagcca accctagaaa accttacccc agtggtgctc agaccagaga
361 ttcgcaaacc agaggttctc agaccggaaa cacccagacc agtggacatt ggttctggag
421 gattcggtga tgtcggtgct cttgagagtt tgaggggaaa tgcagatttg gcttacatcc
481 tgagcatgga gccctgtggc cactgcctca ttatcaacaa tgtgaacttc tgccgtgagt
541 ccgggctccg cacccgcact ggctccaaca tcgactgtga gaagttgcgg cgtcgcttct
601 cctcgctgca tttcatggtg gaggtgaagg gcgacctgac tgccaagaaa atggtgctgg
661 ctttgctgga gctggcgcgg caggaccacg gtgctctgga ctgctgcgtg gtggtcattc
721 tctctcacgg ctgtcaggcc agccacctgc agttcccagg ggctgtctac ggcacagatg
781 gatgccctgt gtcggtcgag aagattgtga acatcttcaa tgggaccagc tgccccagcc
841 tgggagggaa gcccaagctc tttttcatcc aggcctgtgg tggggagcag aaagaccatg
901 ggtttgaggt ggcctccact tcccctgaag acgagtcccc tggcagtaac cccgagccag
961 atgccacccc gttccaggaa ggtttgagga ccttcgacca gctggacgcc atatctagtt
1021 tgcccacacc cagtgacatc tttgtgtcct actctacttt cccaggtttt gtttcctgga
1081 gggaccccaa gagtggctcc tggtacgttg agaccctgga cgacatcttt gagcagtggg
1141 ctcactctga agacctgcag tccctcctgc ttagggtcgc taatgctgtt tcggtgaaag
1201 ggatttataa acagatgcct ggttgcttta atttcctccg gaaaaaactt ttctttaaaa
1261 catcataagg ccagggcccc tcaccctgcc ttatcttgca ccccaaagct ttcctgcccc
1321 aggcctgaaa gaggctgagg cctggacttt cctgcaactc aaggactttg cagccggcac
1381 agggtctgct ctttctctgc cagtgacaga caggctctta gcagcttcca gattgacgac
1441 aagtgctgaa cagtggagga agagggacag atgaatgccg tggattgcac gtggcctctt
1501 gagcagtggc tg
//