LOCUS AK292057 1462 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75771 complete cds, highly similar to Homo
sapiens cathepsin E (CTSE), transcript variant 1, mRNA.
ACCESSION AK292057
VERSION AK292057.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1462)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1462
/clone="STOMA2001587"
/clone_lib="STOMA2"
/db_xref="H-InvDB:HIT000424854"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="stomach"
CDS 49..1239
/codon_start=1
/note="highly similar to Homo sapiens cathepsin E (CTSE),
transcript variant 1, mRNA"
/protein_id="BAF84746.1"
/transl_table=1
/translation="MKTLLLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSE
FWKSHNLDMIQFTESCSMDQSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNL
WVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTV
VGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVY
MSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGC
QAIVDTGTSLITGPSDKIKQLQNAIGAAPVDGEYAVECANLNVMPDVTFTINGVPYTL
SPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLA
PAVP"
BASE COUNT 346 a 409 c 373 g 334 t
ORIGIN
1 gagagaagaa aggagggggc aagggagaag ctgctggtcg gactcacaat gaaaacgctc
61 cttcttttgc tgctggtgct cctggagctg ggagaggccc aaggatccct tcacagggtg
121 cccctcagga ggcatccgtc cctcaagaag aagctgcggg cacggagcca gctctctgag
181 ttctggaaat cccataattt ggacatgatc cagttcaccg agtcctgctc aatggaccag
241 agtgccaagg aacccctcat caactacttg gatatggaat acttcggcac tatctccatt
301 ggctccccac cacagaactt cactgtcatc ttcgacactg gctcctccaa cctctgggtc
361 ccctctgtgt actgcactag cccagcctgc aagacgcaca gcaggttcca gccttcccag
421 tccagcacat acagccagcc aggtcaatct ttctccattc agtatggaac cgggagcttg
481 tccgggatca ttggagccga ccaagtctct gtggaaggac taaccgtggt tggccagcag
541 tttggagaaa gtgtcacaga gccaggccag acctttgtgg atgcagagtt tgatggaatt
601 ctgggcctgg gatacccctc cttggctgtg ggaggagtga ctccagtatt tgacaacatg
661 atggctcaga acctggtgga cttgccgatg ttttctgtct acatgagcag taacccagaa
721 ggtggtgcgg ggagcgagct gatttttgga ggctacgacc actcccattt ctctgggagc
781 ctgaattggg tcccagtcac caagcaagct tactggcaga ttgcactgga taacatccag
841 gtgggaggca ctgttatgtt ctgctccgag ggctgccagg ccattgtgga cacagggact
901 tccctcatca ctggcccttc cgacaagatt aagcagctgc aaaacgccat tggggcagcc
961 cccgtggatg gagaatatgc tgtggagtgt gccaacctta acgtcatgcc ggatgtcacc
1021 ttcaccatta acggagtccc ctataccctc agcccaactg cctacaccct actggacttc
1081 gtggatggaa tgcagttctg cagcagtggc tttcaaggac ttgacatcca ccctccagct
1141 gggcccctct ggatcctggg ggatgtcttc attcgacagt tttactcagt ctttgaccgt
1201 gggaataacc gtgtgggact ggccccagca gtcccctaag gaggggcctt gtgtctgtgc
1261 ctgcctgtct gacagacctt gaatatgtta ggctggggca ttctttacac ctacaaaaag
1321 ttattttcca gagaatgtag ctgtttccag ggttgcaact tgaattaaga ccaaacagaa
1381 catgagaata cacacacaca cacacatata cacacacaca cacttcacac atacacacca
1441 ctcccaccac cgtcatgatg ga
//