LOCUS AK292053 1481 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78286 complete cds, highly similar to Homo
sapiens platelet-activating factor receptor (PTAFR), mRNA.
ACCESSION AK292053
VERSION AK292053.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1481)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1481
/clone="SPLEN2040122"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000424850"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 336..1364
/codon_start=1
/note="highly similar to Homo sapiens platelet-activating
factor receptor (PTAFR), mRNA"
/protein_id="BAF84742.1"
/transl_table=1
/translation="MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLY
PCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTY
CSVAFLGVITYNRFQAVTRPIKTAQASTRKRGISLSLVIWVAIVGAASYFLILDSTNT
VPDSAGSGNVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPV
QQQRNAEVKRRALWMVCTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQ
VTLCLLSTNCVLDPVIYCFLTKKFRKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQ
IPGNSLKN"
BASE COUNT 301 a 473 c 349 g 358 t
ORIGIN
1 gctgctgctc attggagggt agagcagagt gagtcacaca cctgtgcctg ggcccgtcct
61 ctgtctcctg tgcactcatt acctgcttcc tgagctcccc gagaagtcat ccaggacctc
121 cccgagaagc cgtccaggaa acatgctctc aggggacccc catctgcctc agcctctttg
181 tcactgcctg gaccattgtc cctgctgttt ctcagacagc atagaggctg aggctggggc
241 caggacccag acagagacac acggtcactg cagctgaagc cgctgcccct gctacaagca
301 ccaccaggac cagctgatca ttccagccca cagcaatgga gccacatgac tcctcccaca
361 tggactctga gttccgatac actctcttcc cgattgttta cagcatcatc tttgtgctcg
421 gggtcattgc taatggctac gtgctgtggg tctttgcccg cctgtaccct tgcaagaaat
481 tcaatgagat aaagatcttc atggtgaacc tcaccatggc ggacatgctc ttcttgatca
541 ccctgccact ttggattgtc tactaccaaa accagggcaa ctggatactc cccaaattcc
601 tgtgcaacgt ggctggctgc cttttcttca tcaacaccta ctgctctgtg gccttcctgg
661 gcgtcatcac ttataaccgc ttccaggcag taactcggcc catcaagact gctcaggcca
721 gcacccgcaa gcgtggcatc tctttgtcct tggtcatctg ggtggccatt gtgggagctg
781 catcctactt cctcatcctg gactccacca acacagtgcc cgacagtgct ggctcaggca
841 acgtcactcg ctgctttgag cattacgaga agggcagcgt gccagtcctc atcatccaca
901 tcttcatcgt gttcagcttc ttcctggtct tcctcatcat cctcttctgc aacctggtca
961 tcatccgtac cttgctcatg cagccggtgc agcagcagcg caacgctgaa gtcaagcgcc
1021 gggcgctgtg gatggtgtgc acggtcttgg cggtgttcat catctgcttc gtgccccacc
1081 acgtggtgca gctgccctgg acccttgctg agctgggctt ccaggacagc aaattccacc
1141 aggccattaa tgatgcacat caggtcaccc tctgcctcct tagcaccaac tgtgtcttag
1201 accctgttat ctactgtttc ctcaccaaga agttccgcaa gcacctcacc gaaaagttct
1261 acagcatgcg cagtagccgg aaatgctccc gggccaccac ggatacggtc actgaagtgg
1321 ttgtgccatt caaccagatc cctggcaatt ccctcaaaaa ttagtccctg cttccaggcc
1381 tgaagtcttc tcctccatga acatcatgga ctgagctggg ggaagaaggg atatctactg
1441 tggtctgggc accacctctg tgggcactgg tgggccatta g
//