LOCUS AK292041 2530 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78051 complete cds, highly similar to Homo
sapiens SH2 domain containing 3C, mRNA.
ACCESSION AK292041
VERSION AK292041.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2530)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2530
/clone="SPLEN2031622"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000424838"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 69..2180
/codon_start=1
/note="highly similar to Homo sapiens SH2 domain
containing 3C, mRNA"
/protein_id="BAF84730.1"
/transl_table=1
/translation="MTAVGRRCPALGSRGAAGEPEAGSDYVEFSKEKYILDSSPEKLH
KELEEELKLSSTDLRSHAWYHGRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWR
NQALHFKINKVVVKAGESYTHIQYLFEQESFDHVPALVRYHVGSRKAVSEQSGAIIYC
PVNRTFPLRYLEASYGLGQGSSKPASPVSPSGPKGSHMKRRSVTMTDGLTADKVTRSD
GCPTSTSLPRPRDSIRSCALSMDQIPDLHSPMSPISESPSSPAYSTVTRVHAAPAAPS
ATALPASPVARRSSEPQLCPGSAPKTHGESDKGPHTSPSHTLGKASPSPSLSSYSDPD
SGHYCQLQPPVRGSREWAATETSSQQARSYGERLKELSENGAPEGDWGKTFTVPIVEV
TSSFNPATFQSLLIPRDNRPLEVGLLRKVKELLAEVDARTLARHVTKVDCLVARILGV
TKEMQTLMGVRWGMELLTLPHGRQLRLDLLERFHTMSIMLAVDILGCTGSAEERAALL
HKTIQLAAELRGTMGNMFSFAAVMGALDMAQISRLEQTWVTLRQRHTEGAILYEKKLK
PFLKSLNEGKEGPPLSNTTFPHVLPLITLLECDSAPPEGPEPWGSTEHGVEVVLAHLE
AARTVAHHGGLYHTNAEVKLQGFQARPELLEVFSTEFQMRLLWGSQGASSSQARRYEK
FDKVLTALSHKLEPAVRSSEL"
BASE COUNT 506 a 853 c 738 g 433 t
ORIGIN
1 aaaaaaaaag gcaggagccg ctgggtttag gaggtccccg ggttgccggc ggcgacagcg
61 ggggaagcat gactgctgtg ggccgaaggt gccccgcgct ggggtcccga ggggctgctg
121 gagagccaga ggctggcagc gactatgtgg agttctccaa ggagaagtac atcctggact
181 catcgccaga gaaactccac aaggaattgg aggaggagct caaactcagc agcacggatc
241 tccgcagcca tgcctggtac catggccgca tcccccgaga ggtctcggag accttggtac
301 aacgcaacgg cgacttcctc atccgggact cactcaccag cctgggcgac tatgtgctca
361 cgtgccgctg gcgcaaccag gccttgcact tcaagatcaa caaggtggtg gtgaaggcag
421 gcgagagcta cacacacatc cagtacctgt ttgagcagga gagctttgac cacgtgcccg
481 ccctcgtgcg ctatcatgtg ggcagccgca aggctgtgtc agagcagagt ggtgccatca
541 tctactgccc ggtgaaccgc accttcccac tgcgctacct cgaggccagc tatggcctgg
601 gacaggggag tagcaagcct gctagccccg tcagcccctc aggccccaag ggcagccaca
661 tgaagcggcg cagcgtcacc atgaccgatg ggctcactgc tgacaaggtc acccgcagcg
721 atggctgccc caccagtacg tcgctgcccc gccctcggga ctccatccgc agctgtgccc
781 tcagcatgga ccagatccca gacctgcact cacccatgtc gcccatctcc gagagcccta
841 gctcccccgc ctacagcact gtaacccgtg tccatgccgc ccctgcagcc ccttctgcca
901 cagcattgcc tgcctcccct gtcgcccgcc gttccagtga gccccagctg tgtcccggaa
961 gtgccccaaa gacccatggg gagtcagaca agggccccca caccagcccc tcccacaccc
1021 ttggcaaggc ctccccgtca ccatcactca gcagctacag tgacccggac tctggccact
1081 actgccagct ccagcctccc gtgcgtggca gccgagagtg ggcagcgact gagacctcca
1141 gccagcaggc caggagctat ggggagaggc taaaggaact gtcagaaaat ggggcccctg
1201 aaggggactg gggcaagacc ttcacagtcc ccatcgtgga agtcacttct tccttcaacc
1261 cggccacctt ccagtcacta ctgatcccca gggataaccg gccactggag gtgggccttt
1321 tgcgcaaggt caaggagctg ctggcagaag tggatgcccg gacgctggcc cggcatgtca
1381 ccaaggtgga ctgcctggtt gctaggatac tgggcgttac caaggagatg cagaccctaa
1441 tgggagtccg ctggggcatg gaactgctca ccctccccca tggccggcag ctacgcctag
1501 acctgctgga aaggttccac accatgtcca tcatgctggc cgtggacatc ctgggctgca
1561 ccggctctgc ggaggagcgg gcagcgctgc tgcacaagac cattcagctg gcggccgagc
1621 tgcgggggac tatgggcaac atgttcagct tcgcggcggt catgggtgcc ctggacatgg
1681 cccagatttc tcggctggag cagacatggg tgaccctgcg gcagcgacac acagagggtg
1741 ccatcctgta cgagaagaag ctcaagcctt ttctcaagag cctcaacgag ggcaaagaag
1801 gcccgccgct gagcaacacc acgtttcctc atgtgctgcc cctcatcacc ctgctggagt
1861 gtgactcggc cccaccagag ggccctgagc cctggggcag cacggagcac ggcgtggagg
1921 tggtgctggc tcacctggag gccgcccgca cagtggcaca ccacggaggc ctgtaccaca
1981 ccaatgctga agtcaagctg caggggttcc aggcccggcc ggagctcctg gaggtgttca
2041 gcacggagtt ccagatgcgc cttctctggg gcagtcaggg tgccagcagc agccaggccc
2101 ggcgctatga gaagttcgac aaggtcctca ctgccctgtc ccacaagctg gaacctgctg
2161 tccgctccag cgagctgtga ccccagggac atttcccctc tgcagctgcg gacagcgtca
2221 ggggcagagg ggcacacaac tttccccaga gcaccccaag gacactgtga tcaacccgag
2281 aatgttctgg gttcaactca agcatctccc ttgcacctcc agggtcctgc gtggactctg
2341 ggttccatcc cacctgctac atgctcacca ggtctccatt gaggaagaac aggaacgccg
2401 gttcccccac cagcttttgc tgctcccctt cctgctgggg ttccctgttt tcgagccatg
2461 ggaggcaggc tgctcacgcc tcctcactct ctgtctgtcc ctcaccaaca ccaaggcctc
2521 catctcactg
//